Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01436 ATGGCTTCTTCTTCTTCTTCGCCCCAGGAGCAATATGGAACCGAGGCTACTGATAATTATGAGACGACCTGCTGGGGTTGTGGACTTCGCGTTATGCTTCCATCGTGTGCATCTGTTTTCAAATGTGGTTGGTGTGGGGCCATTACAGACCACAACAAAAAGAAACGTGACGAAAAGTGCTTTGGGTGGAGAGTACTGCGTGATCGATGCTTTCTTTCTGTCGTCATCGTTTTTATGTTCTTTGTAATACTTGGTGGGGTGTGGGCAATCTACCCTGTAGTCTTCTCTGTCAGTCTTCTTTGGGGAATTTTTCACTCAATCATTACAACAATATTGTCCATAGCTACAATTTCCTTTTTCAGCCTTGCAGCATTTAGGTGTGCTGGAACACCACCAAATATATTATGGGGAAGCTACCCCACGGTAGGGAAAGGTGACCTTGACAATTATACATTCTGTCACTATTGCTCGAAGCCAAAATCACCTAGAGCACATCATTGTCGTTCATGTAGAAAATGTATACTGGATATGGATCATCACTGCCCATTTATTGGGAACTGTGTTGGTGCAGCTAATCACTACAGCTTCATTTGCTTCCTCATTTCTGCAGTTTTGAGCACAATATATGTCTCTATAATGGCTGTGTATTCTAGCTTGCATATGTGGCCACCATTGTCACACACTTTCGGACGCTTAAAGGGGATTACTGGCCGAGATCTAGCATGGAGAATTATTAATGAAATTTTTATCACCTTCTTGAGATCTGCGCTGTTTCTATCGTCTAGAGGACTTCTTCTTTTGTATCTGTTTATTGCGAGTTTTTCATTGCAGATAGGATTGAGTGTTCTTTTATGGCAGCAACTCACTTTTATATATGAAGGGAAAACTTATCTGAGTAACTTAAGTTCACATGCAGATAATGAAGAAGAAGAAAAGAAAGATTGTCAAAATCTTGTTAGATTTTTTGGTCTTCAATATTCTGTAGCAAGATTTTTGTCAATTTTCCATGTTACTCGGAAGAGGCATGACACATAA 1035 0.4029 MASSSSSPQEQYGTEATDNYETTCWGCGLRVMLPSCASVFKCGWCGAITDHNKKKRDEKCFGWRVLRDRCFLSVVIVFMFFVILGGVWAIYPVVFSVSLLWGIFHSIITTILSIATISFFSLAAFRCAGTPPNILWGSYPTVGKGDLDNYTFCHYCSKPKSPRAHHCRSCRKCILDMDHHCPFIGNCVGAANHYSFICFLISAVLSTIYVSIMAVYSSLHMWPPLSHTFGRLKGITGRDLAWRIINEIFITFLRSALFLSSRGLLLLYLFIASFSLQIGLSVLLWQQLTFIYEGKTYLSNLSSHADNEEEEKKDCQNLVRFFGLQYSVARFLSIFHVTRKRHDT 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01436 344 Coils Coil 298 318 - -
Trre1g01436 344 ProSiteProfiles DHHC domain profile. 151 201 - -
Trre1g01436 344 PANTHER PALMITOYLTRANSFERASE ZDHHC16 69 314 - -
Trre1g01436 344 Pfam DHHC palmitoyltransferase 150 297 IPR001594 GO:0016409
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01436 Trre-Chr1 10838608 10843657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01436 74 212 Lipid Metabolism Gene Families AT4G22750 32.192 3.42e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01436 - - gmx:100792359 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01436 1 10838608 10843657 Trre1g01436 1 10838608 10843657 ECH