Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01343 ATGAACACAACAAAAAGATATACCGAGATATCTCATTTCAGCCATCCAAAACACAAACTAACATTCCAATACTCAGAATTTCCATTTAAATGTGATGGCTGCAAAGAAATTGGTATAGGCTCACGTTATAACTGCAACATTTGTGACTATGACCTTCACATGCATTGTTCCATTCCATCCCCTTCTCTTTTTCACCCTTTCTACCCAAAATGTTGCTTCCAATTTTTGTCAAAGCCGCCCGGCGACATACCTCGTTATTGCAACGCATGCGAAAAGAGTGTTACCGGTTTTGTCTACCACTGCTTTTCGTGCGGTTTTGATCTTCACCCTTGTTGTGCAAAGCTTCCAATGATACTCGATGATCACGGTGAAGTGAAGTTGTATTTATATCGGAAAGTGAGTTCTTCGTGTCAGCGTTGTGGACAAAAAGGACGAAGTTGGAGTTATAGGTCGTCATGTAAGAAGTATAACCTACATGTAGCATGTGTGAGGGAGATGATTGTGGAGAGTTGGCATCATATTTACGTTGGACGAAGCAACGGAAGAACAACAGCAATGGCAACAATGGTTGAGACAGGGGTTCCTCTGAGTTTGAAGAGTAATCTGCACACTGCACAGAATGGCGGGGGAAGAAGCAAAGGGAAGGTGAGGAAGTATGCTGAGATGGCTGGAATGGCTGTACAGATTGTTGTGTCTGCTGTTTTAGGAGATCCAACTGTTCTTATTGCTGGGATCATGGGATCATTGATGTCGCGAACCTAA 762 0.4291 MNTTKRYTEISHFSHPKHKLTFQYSEFPFKCDGCKEIGIGSRYNCNICDYDLHMHCSIPSPSLFHPFYPKCCFQFLSKPPGDIPRYCNACEKSVTGFVYHCFSCGFDLHPCCAKLPMILDDHGEVKLYLYRKVSSSCQRCGQKGRSWSYRSSCKKYNLHVACVREMIVESWHHIYVGRSNGRTTAMATMVETGVPLSLKSNLHTAQNGGGRSKGKVRKYAEMAGMAVQIVVSAVLGDPTVLIAGIMGSLMSRT 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01343 253 Gene3D - 21 67 IPR043145 -
Trre1g01343 253 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 17 71 IPR002219 -
Trre1g01343 253 Pfam C1 domain 13 57 IPR004146 -
Trre1g01343 253 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 5 250 - -
Trre1g01343 253 SUPERFAMILY Cysteine-rich domain 34 119 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01343 Trre-Chr1 10089225 10090333 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01343 - - tpra:123902843 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01343 1 10089225 10090333 Trre1g01343 1 10089225 10090333 ECH