Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01337 ATGGTGTCTTTTCTAAGAAAGTTAAGAACTTCTTCTGTTCCTTCAATTGAGGAAACAGAAAATAACAATAGCATTAGTAGTAGCAACTATGAATATTCTTTTGCTGTTGTTTACACTGGTCCTCCTCTTAATCATTCAATCCCTGAAATCCCTACTTTCAAAATTGATCAAATTCCAATTGCATCCATAGCTCAAAAAACTCTTTCTCATGATTTCAATGTTCCTGTTATTCAACCTCTTGGTAAAAAACTTCATCACAAAAATAAGCAGCATAGACACAAAAAAACCACTTCAGATTCTACTGTTTATCCAAATTTAGATTCTCATCATGTTGTTCAAGTTGAAACATCAAAAACTGATGTTGATGTTAATGTTGATGTTGATTTGACATCATGTGAAGTTGTTGATGATGTTCATGTTCCTACAAGTTCTGATACAATAGAGTCAGAATCATGTTTAGGGTCTAATTCTTGTGAGATATGTTCAATCAGTGAAGAATCTGAAGATGATGTGACAGTTAGAACAAAACATGTTAAACAGCCTTCCGCGGTTACATTCCGCGACCCTGAATCGAATTATGTGCTAGAAACCGAAAGCGGAGAGTTTTTCGATAATGTATCTTTGAAGTCACATGCAATTAGACCAGGAAAAAAAGGGTCTTGTTATAAGTGTCTTAAAGGGAATAGTTTAACTGAGAAAGAAATTTGTATTGTTTGTAGTGCAAAGTATTGTAGAAACTGTGTGATAAGAGCAATGGGATCTATGCCTGAAGGAAGGAAATGTGTTGGTTGCATTGGTTATGGAATTGATGAGAATAAAAGAAGGAAGCTTGGAAAATGTTCTAGGATGATGAAACAGTTACTTTCTGAGTTAATTGTTGATCAAGTTATGAAAGTTGAAAGGTTTTGTGAAGCTAATCAAATTCAGCCTAAGCTTGTTGAAGTTAACTTGCAATCACTTAATAGAGAAGAGCTTAAGTTGTTGCTTAACTGTAAAAATCCGCCAAAAGAGCTTAAACCAGGATCTTATTGGTATGACAAATCTTCTGGATTTTGGGGAAAGAAAGGTCAACCACCTTGTGAAATCATCAGTCCCCGGTTGGATATTGGCGGTCGCTTGAATAAAAACGCAAGCAATGGAAACACAAACGTGACGATAAATGATCGTGTGATTACGAAAAAAGAGCTAAGGATGCTAAAGATAGCAGGAGTGCCATGTGAAGGAACTCCTAACTTTTGGTTGACTGCTAATGGATCAATCAGCGAAGAAGGACAGAAGAACGATAGGGGACGTATATGGGACAAGACCGGTACAAAGGTTGCTTGCGCTCTTCTGTCACTACCAGTTCCTTCAAAATCTGTGATTCTTGCTGATGAAGGTGAAACAGCTAACAATCTCAGCATTCATAAGAAAAAAATTCAAAAATTTCTACTTGTTGGTTGTGTCAATTCTGGATCATGTATTATATTTAAACAGGCCAAACTTCTTTATAACGCTCCTTTCTCGGAAAATGAGCTTCAAAATATCAAGTTGGTGATTCAAAGCAACCTGTTTACCTACCTTGGTATACTTCTAGAAGGGCGCGAAGATTTTGAAGAAGAGAGTTTGCTCAATAATAGGAAAAGACTGCCTTCTGATGAATCCACTTCATCTGCGGGGGATTCTGGTGAAAATGTTGATACAACACCCTACTCAATTGGTCCAAGACTGAAAGGTTTCGCAGATTGGTTACTCAAATGCATGTTGTCAGGTAACATGGAAGCAATATTTCCGGCTGCTATACGTGAATATGGGCCAATGGTGGAGGATTTGTGGAGGGACGAGGCCATTCAAGCGACATATAACAGGAGAAATGAACTAAAAATGCTACCTAGAAGTGCTAACTATTTTCTAGATAGGGCTATTGAAATTTCTAAGGTAGATTATCAACCTTCTGATATGGATATTTTGTATGCCGAGGGGATATCATTATCCAACAGTCTCACATCAATGGAATTTTCATTTCCAAAATCAAGCCGAGAGGAGTCTTTGCCTCTTGAGTATCAACACGATTCGTCTCTCAGATACCAACTAACCAGAGTACATCCAAAAAGTCTTGGAGAAAACTGCAAGTGGTTGAACATGTTCGAAGAAACCGATGTTGTTTTATTCTGTGTCTCCTTAAGCGAATACGATGAGTACGTTGTTGACGATAAAGGAGTTTCTACAAACAAAATGTTGGTAGCAAAAAACCTATTTGAAAACATCATTGCTCATCCAAATTTCAAGAATAAGAAATTCCTTTTAATACTAACCAAATTCGATCTTCTTGAGGAAAAGATCGAACATGTTCCACTAAAAACGTGCGAATGGTTTCGTGACTTCAATCCGGTTATAAGTCACAATACAAAAAAATGTGCTAACAATGGAACTATGCCTTCATTAGCTCAAAGTGCTTTTCAATATATTGCTATCAAGTTTAAGAGATTGTTCCATTCGCTTACCGAAAGAAATTTATTCGTTTCTTTGGTTACTGGATTAGAACCGGATACGATCGATGATGCTCTTAGATATGGTAGAGAGGTTATAGAATGGGAAAAATGGGATCCTTCTGTTGTTAATGAGAAATCTGAGATTACTACAACAAGCAATGAAGATGGAAGTTCTTCTTATAATAAAGTTTAA 2664 0.3664 MVSFLRKLRTSSVPSIEETENNNSISSSNYEYSFAVVYTGPPLNHSIPEIPTFKIDQIPIASIAQKTLSHDFNVPVIQPLGKKLHHKNKQHRHKKTTSDSTVYPNLDSHHVVQVETSKTDVDVNVDVDLTSCEVVDDVHVPTSSDTIESESCLGSNSCEICSISEESEDDVTVRTKHVKQPSAVTFRDPESNYVLETESGEFFDNVSLKSHAIRPGKKGSCYKCLKGNSLTEKEICIVCSAKYCRNCVIRAMGSMPEGRKCVGCIGYGIDENKRRKLGKCSRMMKQLLSELIVDQVMKVERFCEANQIQPKLVEVNLQSLNREELKLLLNCKNPPKELKPGSYWYDKSSGFWGKKGQPPCEIISPRLDIGGRLNKNASNGNTNVTINDRVITKKELRMLKIAGVPCEGTPNFWLTANGSISEEGQKNDRGRIWDKTGTKVACALLSLPVPSKSVILADEGETANNLSIHKKKIQKFLLVGCVNSGSCIIFKQAKLLYNAPFSENELQNIKLVIQSNLFTYLGILLEGREDFEEESLLNNRKRLPSDESTSSAGDSGENVDTTPYSIGPRLKGFADWLLKCMLSGNMEAIFPAAIREYGPMVEDLWRDEAIQATYNRRNELKMLPRSANYFLDRAIEISKVDYQPSDMDILYAEGISLSNSLTSMEFSFPKSSREESLPLEYQHDSSLRYQLTRVHPKSLGENCKWLNMFEETDVVLFCVSLSEYDEYVVDDKGVSTNKMLVAKNLFENIIAHPNFKNKKFLLILTKFDLLEEKIEHVPLKTCEWFRDFNPVISHNTKKCANNGTMPSLAQSAFQYIAIKFKRLFHSLTERNLFVSLVTGLEPDTIDDALRYGREVIEWEKWDPSVVNEKSEITTTSNEDGSSSYNKV 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01337 887 FunFam Extra-large guanine nucleotide-binding protein 3 502 653 - -
Trre1g01337 887 MobiDBLite consensus disorder prediction 542 562 - -
Trre1g01337 887 MobiDBLite consensus disorder prediction 536 563 - -
Trre1g01337 887 MobiDBLite consensus disorder prediction 84 104 - -
Trre1g01337 887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 703 851 IPR027417 -
Trre1g01337 887 FunFam Guanine nucleotide-binding protein subunit alpha 679 826 - -
Trre1g01337 887 SUPERFAMILY Transducin (alpha subunit), insertion domain 501 652 IPR011025 GO:0007165
Trre1g01337 887 PRINTS Alpha G protein (transducin) signature 712 740 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Trre1g01337 887 PRINTS Alpha G protein (transducin) signature 642 664 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Trre1g01337 887 PRINTS Alpha G protein (transducin) signature 475 490 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Trre1g01337 887 PRINTS Alpha G protein (transducin) signature 760 769 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Trre1g01337 887 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 252 860 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Trre1g01337 887 SMART galpha_1 450 837 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Trre1g01337 887 Gene3D - 650 864 IPR027417 -
Trre1g01337 887 Gene3D - 502 649 IPR011025 GO:0007165
Trre1g01337 887 Pfam G-protein alpha subunit 462 850 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Trre1g01337 887 ProSiteProfiles G-alpha domain profile. 472 872 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01337 Trre-Chr1 9994231 9998802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01337 - - tpra:123902613 1540.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01337 1 9994231 9998802 Trre1g01337 1 9994231 9998802 ECH