Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01330 ATGGCTACAGCCTCAGCAGCAACAGCATCTACAATAACTGTTGTAGGAAGCTCAATTATTGGTTCAAAGTCAAGGAGTACTAAGAATGTGAAATTGTTCAAAGGATTCAACACTTTCAATGGATTGAAAGCACAAAACAACCCTGTGTCTTCACTAGGTGTTACTGTTTCAAGTGAACAAGCTTTTGCAAAAGTTATGTGTTCATTGAAATATCCATCAATGGTTGGAAGAAGAAGTAGAGGTGGTGGTGCTGCTTCTTCAACATGTAATGCTGCAGGTGAGATTTTTCAAATTGCAGCTATTTTAAATGGTCTTACTCTTGTTGGTGTTGCTGTTGGATTTGTTCTTCTTCGAATCGAAGCCGCTGTTGAAGAAGCCGAGTAA 384 0.3906 MATASAATASTITVVGSSIIGSKSRSTKNVKLFKGFNTFNGLKAQNNPVSSLGVTVSSEQAFAKVMCSLKYPSMVGRRSRGGGAASSTCNAAGEIFQIAAILNGLTLVGVAVGFVLLRIEAAVEEAE 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01330 127 SUPERFAMILY PetM subunit of the cytochrome b6f complex 92 124 - -
Trre1g01330 127 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 1 127 - -
Trre1g01330 127 Pfam PetM family of cytochrome b6f complex subunit 7 93 120 IPR012595 GO:0009512
Trre1g01330 127 Hamap Cytochrome b6-f complex subunit 7 [petM]. 91 123 IPR012595 GO:0009512
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01330 Trre-Chr1 9946448 9946831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01330 - - gmx:100306224 142.124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01330 1 9946448 9946831 Trre1g01330 1 9946448 9946831 ECH