Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01327 ATGGGTCCTCTTACGATGGATACCATCTTTGATCTCATCGAAGAAGCTAAGCTCCGTTTTCTTTGGTGGTCTCTTTGTATATTCGCCATTTCCTATTTCTTAACTCATACAAGTAAATCAATGTGGATGAATATACCAATGTCCATTCTTTTTTGCGCTGGTTTGAGGATTCTTGTGAACAAAGTGGAGTTTCGTTGGAAGGTTCCGCCACCTAAACTACAAACTTACCTATCACATTTGGAGAAAAAACAGTTGCTTATAGACGATGAACGCCTATCTACTTCACCTTCCCCTCCAAAATGGAAGAAAAAGATTGATTCTCCTGCAATAGAGGCTGCCTTGAACGATTTCATTGATTTGATATTGAAGGATTTCGTGGTAAATATGTGGTATGCAGACATTACTTCAGATGGGGAGTTTCCCGAGCAGATACGTGACTTAATCATGGATGCTCTTGCTGAAGTCTCGGTTAGGGTTAAAGAGATAAACATTGTTGATTTGCTCACAAGTGATATAGTTGATTTAATAAGCGATCATATCGACCTCTTCAGAAGAAATCAAGCTGCCATAGGTAGGGATGTTATGTTAACACTGTCTTCTGAGGAAAGGGATGAAAGATTGAAATTCCATCTGATGAAGTCCAAGGAGCTTCATCCAGCACTAATATCTCCAGAGAGTGAGTACAAGGTTCTGCAGAAGCTAATGAGTGGAGTACTAGCTACGGTACTAAGAAAACCAGAAGCTCATGTTCCAGTCGTTCGATCAATAGCTCGGGAAATTTTAACCTGCTTGATATTGCAACCTGTAATGAATTTGGCATGTCCCGCGTATATCAATGAGCTGGTTGAGTCTCTTCTACTTGTCCTTAATGACGGGGATATAAATTGGATGGGCGGTGGAGATCAGAGTTCAAATGCTACAACACTTAATCATGATAATCACACAGCCTCTGCTGATTGGGCACAAATGCTGGATGCAGCAACTCAGAGAAGAACCGAAGTTCTTATGCCTGAGAATCTTGAGAACATGTGGACAAGAGGAAGGAATTACGGAAGGAAAAATCATAAAAATGCCAAATCCAGCTCTTGTTCAAAATATTCTTCTGCAGATCAGTCACTGTTCGATAGACATATCGCTCATCATGAAACATCAGCGAGTAAACCTGGTGGAACACATGCGTATCCATTGCACACTGTTGGTTCAGATACCATACTATATGATGTCAGCACAACTATGCCGGAGTGTTCGGCAGATCATGACAAGGATTTATCTTTTGAAGCTGATCATCAAGTTGATGAAGCGAGTGATATCAAGGATCTTGGTTCTATTAAAAATAAACTTCCACTCAAGAGAATTGCAAGTTCTTCTGTTGTCGGAACCCATCCTCATAAAGGTGGGCTCAATGCTTCCGAGTTCCATGCTCCTGAATTTAAAAAGAATGAAGGGTTACGGGGAAAGAGTAGTTCTGACATGGTTATTAAGAAAGAGGGACAAGGTGTTCCGAAGCTTCGGTGCCGGGTAATGGGAGCATATTTTGAGAAACTTGGATCCACTTCTTTTGCTGTATATTCAATTGCTGTGACTGACGGGCAAGAAAAAACTTGGTTTGTAAAACGAAGATACAGGAACTTTGAGCGATTGCATCGACATCTAAAACATATTCCCAATTACACATTACATTTGCCTCCCAAAAGGATATTTTCCTCAAGCACAGAGGATGCCTTTGTACATCAGCGTTGCATTCAACTAGATAAATATATCCATGATCTCCTGTCGATAGCTAATGTCGCTGAACAACATGAAGTATGGGACTTCTTAAGTGCTTCCTCAAAGAATTACTCTTATGGGAAACCTTCTTCAATGATGAGGACCCTGGCAGTCAATGTAGATGATGCCGTGGATGATATTGTACGGCAGTTTAAAGGTGTTTCAGATGATTTAAAGCGAAAAATTGTCACTGTAGCATCTCCAACCGCTGAAGCTTCTTCTACATCTTTCCCTTGGAACATGGATGAAATGGATAGAAGTATTCCGAGGAAAAGTGCTATAGAGAGTGCGTTGAGTTCTGATAACGAGGAAGGTGAAAAAGAAGCCAATAATGGCCATGAGAATATTGATAGAGAAATGGCAGAAGATCATGCGTGTCATTCTGACAATGAACCGAGTTCGAAGGATTATTCACAAGGGGTAACAAACCATGGTAATGAGTCTAGTAACTTGGATCTTGATAGAAAACATGATGCTGCGATAGAAGCAAAGGTTGGCAAGGATGTTCCAGTTCCAGCTACAAATGGAACTCTAAGTCATGATAATCCGGACGATCCGATTCAAGTGCCGCCTGAGTGGACCCCACCTAATGTGACTGTGCCTATTCTGAATTTGGTTGACAACATATTTCAGCTTAAGAAAAGAGGCTGGCTGAGAAGACAGGTCTTTTGGATATCAAAACAGATATTACAGTTGGTGATGGAAGATGCCATTGATGATTTGCTTTTGAGTGAGATTCATTGGCTCCGGAGAGAAGAAACCATTGCCCAAGGAATTCGGTGGGTCCAAGATATCCTCTGGCCTGGTGGTACGTTTTTCTTAAGAGTTCAGACCCCTGAGGTGTTCGTTGGTGGCGGTGTAATTGATCACAAGCCTTTACAACCCATAAGTGAATCTGGCGGAAGGAACACCCACAAATCACAGTCAGGGTGTTTCGAGGAACAACTAGAAGCTGCTCGTAGAGCAAGTGAATTGAAGAAACTACTCTTTGATGGAGCTCCAGCAGCCTTAGTTAGTTTAATCGGACAGAAGCAGTACAAACGAGTTGCCAGTGATATATATTACTTTACTCAGTCTTCCATATGTGTGAAGCAACTTGCTTATGCAATCCTTGAACTTCTCCTTATATCTATCTTCCCCGAATTGCGCAATGTAGTCATGAGCGTGCACGAGAATATGCGCAATCACAAACCTGTATAG 2967 0.4149 MGPLTMDTIFDLIEEAKLRFLWWSLCIFAISYFLTHTSKSMWMNIPMSILFCAGLRILVNKVEFRWKVPPPKLQTYLSHLEKKQLLIDDERLSTSPSPPKWKKKIDSPAIEAALNDFIDLILKDFVVNMWYADITSDGEFPEQIRDLIMDALAEVSVRVKEINIVDLLTSDIVDLISDHIDLFRRNQAAIGRDVMLTLSSEERDERLKFHLMKSKELHPALISPESEYKVLQKLMSGVLATVLRKPEAHVPVVRSIAREILTCLILQPVMNLACPAYINELVESLLLVLNDGDINWMGGGDQSSNATTLNHDNHTASADWAQMLDAATQRRTEVLMPENLENMWTRGRNYGRKNHKNAKSSSCSKYSSADQSLFDRHIAHHETSASKPGGTHAYPLHTVGSDTILYDVSTTMPECSADHDKDLSFEADHQVDEASDIKDLGSIKNKLPLKRIASSSVVGTHPHKGGLNASEFHAPEFKKNEGLRGKSSSDMVIKKEGQGVPKLRCRVMGAYFEKLGSTSFAVYSIAVTDGQEKTWFVKRRYRNFERLHRHLKHIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYIHDLLSIANVAEQHEVWDFLSASSKNYSYGKPSSMMRTLAVNVDDAVDDIVRQFKGVSDDLKRKIVTVASPTAEASSTSFPWNMDEMDRSIPRKSAIESALSSDNEEGEKEANNGHENIDREMAEDHACHSDNEPSSKDYSQGVTNHGNESSNLDLDRKHDAAIEAKVGKDVPVPATNGTLSHDNPDDPIQVPPEWTPPNVTVPILNLVDNIFQLKKRGWLRRQVFWISKQILQLVMEDAIDDLLLSEIHWLRREETIAQGIRWVQDILWPGGTFFLRVQTPEVFVGGGVIDHKPLQPISESGGRNTHKSQSGCFEEQLEAARRASELKKLLFDGAPAALVSLIGQKQYKRVASDIYYFTQSSICVKQLAYAILELLLISIFPELRNVVMSVHENMRNHKPV 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01327 988 ProSiteProfiles PX domain profile. 501 613 IPR001683 GO:0035091
Trre1g01327 988 PANTHER PX SERINE/THREONINE KINASE PXK 103 983 - -
Trre1g01327 988 SUPERFAMILY PX domain 503 610 IPR036871 GO:0035091
Trre1g01327 988 MobiDBLite consensus disorder prediction 721 737 - -
Trre1g01327 988 ProSiteProfiles PXA domain profile. 107 286 IPR003114 -
Trre1g01327 988 Gene3D - 504 615 IPR036871 GO:0035091
Trre1g01327 988 Pfam Sorting nexin C terminal 806 949 IPR013937 -
Trre1g01327 988 Pfam PX domain 531 608 IPR001683 GO:0035091
Trre1g01327 988 SMART PX_2 499 609 IPR001683 GO:0035091
Trre1g01327 988 SMART PXA_3 107 290 IPR003114 -
Trre1g01327 988 MobiDBLite consensus disorder prediction 712 775 - -
Trre1g01327 988 CDD PX_SNX19_like_plant 503 608 - -
Trre1g01327 988 MobiDBLite consensus disorder prediction 738 753 - -
Trre1g01327 988 Pfam PXA domain 107 284 IPR003114 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01327 Trre-Chr1 9931472 9937565 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01327 K17925 - gmx:100804013 1400.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01327 1 9931472 9937565 Trre1g01327 1 9931472 9937565 ECH