Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01319 ATGGCACCACCAAAGACGACGGCGCGTGCGATCTCACAAGAAGCATTCAACGAACTAGTAAACGAAAACATCAACGACCTCGAAATGGACCCTACCGAAGCACTCCAAGATGCAATCCAAACCCTCACTCTCCAAGGCGTCGATCTCTCAGGTATCGTGACTTCCGTTCCTGGAGAGAGTAATCCGGTGATAGAGTGTTTGGAAAAGTTGAAACGGTTGGAGTCTGAAGAGGATGCATTGGATGAGATTGCGGAAGTGTTTGATAGACTCTATGAATTGTGTGGCGGTGACGATGGGAATGTTAATGCAGCTATTGCGGCGAAAAATGGCGGAGTTGAATTGGTTTGTGATGTTTGTTCTAAGATAAGTAGTGGCAATGGATCTCAACTTGTTTCTGGTTTGAATGCTATGGCGTCACTGCTTCACGATGTTCAAAGTACAGGAACGTTCCAGAACAGTAATGGACCAAGGATTATAGTTGCTATCTTAAATAATAACAAGAAAAGCACAGATGTGTTAAATAGTGGCTTCCGTGTTGTGGCTTCAGCTGCAACTGGTGATGAGATTGTCAAGGATTCATTTATGGAATTGAAAGTTGATGAGCTAATTGTGGAGATAATGTCCTTACATAAGAACCCTGGCATTCAAAGTTTATATGATGCTATTCGTGTACTTTTGACGCCTGATGATAATCGTGTTCTAGCTTCTCAAGTATATGGGTATGCACGAAAATTCGCTAAGATTGGAATTCCAGAAGCTCTTGTGGATTCTCTACACACAGGACTTAGCTCACCTGACCTAATTTCAGCATGCATCACTTTAAAAGCCGTTGCAGTAAATGATGAAATATGTAAATCCATTGCTGAAAAAGGTGGTATTGATGTAGTACTCAAATGTATAGATGACAGTGGTGAACAGGGCAACAAAGAGGTGGCAAAAGTTTGTTGCTCATTACTTTCCAAGTTGGCAGGAAGTGACGCAAACAAGAGTGCAATTGTTGGGAAAGGGGGTATAGATAAGCTAATCAAACTTTCAGCCAGATATGCTGACGATCCTTCTGTTTTGCAAGAGATCATGTCTATTATTTCTGTGCTTTCGCTAAGATCCCCGGAAAATGCAGCCCGTGCCATTGAAGCTGGTGCTGGTGATCTTGCTATTCAAGCCATGCAAAAATTTCCTGCAGCACATCAAATGCAAAGAAACTCCTGTCTTATGATCAGAAATCTAGTAGCGAGAAACCAAGAGAACAGAACTATTCTGCTTAAGAATGGAATTGAGAAATACATAAGGAAGGCAAAGCAAACACATGCAAACTGTAAGGAAGCTGCTACTGATGCCTTGAGGGATTTGGGGCTGGATAGTTACAATTTGTAG 1374 0.4199 MAPPKTTARAISQEAFNELVNENINDLEMDPTEALQDAIQTLTLQGVDLSGIVTSVPGESNPVIECLEKLKRLESEEDALDEIAEVFDRLYELCGGDDGNVNAAIAAKNGGVELVCDVCSKISSGNGSQLVSGLNAMASLLHDVQSTGTFQNSNGPRIIVAILNNNKKSTDVLNSGFRVVASAATGDEIVKDSFMELKVDELIVEIMSLHKNPGIQSLYDAIRVLLTPDDNRVLASQVYGYARKFAKIGIPEALVDSLHTGLSSPDLISACITLKAVAVNDEICKSIAEKGGIDVVLKCIDDSGEQGNKEVAKVCCSLLSKLAGSDANKSAIVGKGGIDKLIKLSARYADDPSVLQEIMSIISVLSLRSPENAARAIEAGAGDLAIQAMQKFPAAHQMQRNSCLMIRNLVARNQENRTILLKNGIEKYIRKAKQTHANCKEAATDALRDLGLDSYNL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01319 457 PANTHER UNCHARACTERIZED 7 451 - -
Trre1g01319 457 SUPERFAMILY ARM repeat 84 443 IPR016024 -
Trre1g01319 457 Gene3D - 58 457 IPR011989 -
Trre1g01319 457 SMART arm_5 325 367 IPR000225 GO:0005515
Trre1g01319 457 SMART arm_5 413 452 IPR000225 GO:0005515
Trre1g01319 457 SMART arm_5 280 324 IPR000225 GO:0005515
Trre1g01319 457 SMART arm_5 369 411 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01319 Trre-Chr1 9890852 9895538 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01319 K24166 - gmx:100527792 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01319 1 9890852 9895538 Trre1g01319 1 9890852 9895538 ECH