Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01190 ATGGATCAATCTCAGAATCAGAGATCACTTTCAACAACAACACCTTCACGTTCCGTTCAATTCCACCCTGCTCGTGTACCAATTCTCGATCTCTTCAACCTCTACTTAGGACTTGGTAGAAACAGTCGCAACAAACCCGATGACTCACTCCGTGAACCACCGAACAAGACGCAGAAACGTGTGCACGCTATTAACAGAGAGCTTCCACCGCCGAATGAGCAATTCATTATTGATTTTGAGCAACTTCAAAGTCAGTTTCCTGACCATGAGCAATTGCGTTCTGTGACAGAAGCTATGCTTATACCGCTCGTTGTACAGTGTAGTGGTCATGGACCACGATCAGACTTCCTTCTTTTTGCTTTACGGAGCTTGTGCGGTATTGGGTGCATTAACTGGGACTCCTTTCTTCCCTCCCTTCTTTCTTCAGTTTCTTCGGCAGAATTACCGGTTGGGCAAACGAGTCAAGCAGTGTCAACAGTCACCTCTTCTAGCTTATCACAGCCGGGAATGCTGCCTCCTCAAAGCACAGTTGCTAATTCTTCTAATTTTCAGTCTTCAAATCCTGCTTCTCCATTGACTTCTGTCCACACAATTGGCTCCCCTGCACAGTCATCTATGGAGCCGTTGTCTTGTGCAGCTTTATCTCCGGTAAAATCATCTGATAATTCGTCGGCTGGACAACAGTCTAAAGTAAGAGGCAGCTCATCGGTTCGAAATAATGATATCAGTAACAGTAGCCTTCGCCAGCTATGTTGCAAGATTATTTTAACTGGTCTTGAGTTCAATTTAAAACCTGTGACATATGCCGAAATCTTCCACCATATGCTGAATTGGCTGGTAAATTGGGACCAGAGACAGCAGGCAGTTGACGAATCTGATATTCCAAAATCATGGAGACCTGACAAAACCGTAATTGCATGGCTACATAGTTGCTTGGATGTGATATGGCTTTTAGTTGACGAGGGAAAATGCCGGGTTCCTTTTTATGAATTATTACGTAGTGATTTGCAATTCATAGAGAATATACCTGATGATGAAGCATTATTTACACTTATCTTGGAGATCCACAGGAGACGAGATATGATGGCTATGCACATGCAAATGTTAGACCAGCATCTACATTGCCCTACATTTGGGACTCATCGGATCCTGAATCAGACACCACCTATTTCAAGTGAAGCAACAGCACACCTGCGACTATCACCGATCTCATATTTAAGTGTACTTGGAGAACCATTGCACGGAGAGGATATTACAATCTCTGTTCGGAAGGGAAGTTTGGACTGGGAGAGAGCTGTACGTTGCATCAGGCATGCTCTCCGTACTACACCTTCACCTGATTGGTGGAGAAGGATACTGGTACTGGCTCCTTGCTACAGGCTTTCATCTCACGGGACGACTGCTGGTGGTGTTTTTTCTTCAGAGATGATCTGTGAGGCAACTATTGATAGAATTGTAGAACTATTGAAATTAACAAATTCAGAGATAAATTGCTGGCAGGAATGGCTTGTCTTCTCTGATATTTTCTATTTTATTATGAAAAGTGGGTGCATTGATTTTGTCGATTTTGTGGACAAGCTGGTCTCACGTCTTACAGAGGGTGATCATCGCATACTTAGGACAAATCATGTTACTTGGCTGCTTGCACAGATAATACGAATTGAGCTGGTCATGACTGCTTTGAATACAGATCCTAGAAAGGTGGAAACAACCAGAAAAGTTTTATCATTTCATAGAGAAGACAGAAGTTCGGATCCTAATAGTCCTCAAAATATCTTGCTTGATTTTGTAAGCAGTTGTCAAAATTTACGTATATGGTCATTGAACACTTCAACCAGAGAATACCTGAATAATGAACAGCTTCAGAAAGGAAAGCAAATAGATGAATGGTGGAGACAAGCAAGCAAAGGAGACCGAATGATGGATTATATGAATATGGACGAACGCTCAATAGGGATGTTTTGGGTTGTGACCTACACAATGGCACAGCCTGCTTGTGAAACAGTAATGAGCTGGCTAACTTCTGCTGGAGTTACTGACTTGATACCAGCAACAAATCTTCAACCAACTGAGAGATTAGTGGGTACACGAGAAGTGAGCCCATTGCCCATGTCATTGATATCGGGGTTTTCAATGAACCTATGTTTGAAGCTGTCTTATCAAATGGAAGATTCTCTGTTTTCTGGGCAGATTGTACCCAGCATTGCAATGGTGGAGACATATTCTAGATTGCTGCTTATTGCACCTCATTCACTATTTCGATCGCATTTCAATCATTTGGTGCAAAAAAGTCCTTCTTTGTTGAGCAAGCCTGGCGCAACACTTTTAGTGCTTGAGATATTGAACTATCGACTTCTTCCACTTTACAGGTATCAGGGAAAAAGCAAAACCTTGATGTATGATGTTACAAAGATAATTACTGCTCTAAAAGGAAAAAGGGGAGATCATCGAGTATTCAGATTAGCTGAAAATGTGTGCTTGAATCTTATATTCTCATTGAGAGATTTCTTCTTGGTTAAAAGGGATGGGAAGGGCCCAACGGAATTTACTGAAACTTTGAACAGAGTGTGTGTTATAACACTTGCTATACTTATTAAGACTCGCGGGATTGCAGAGGCTGAGCACCTGCTTTATCTCCCAAGCATGTTGGAACAAATTATGGCAGTCGGCCAACATACATGGTCAGAAAAAACCCTACGATACTTCCCGCCTGTTCTTCGTGAAGCATTGAGTGGTCTACCAGATAAAAGGAGCGTTGCAGTCCAAGCATGGCAGCAGGCTGAAACAACCGTTATACACCAGTGCACCCAGCTTCTTTCACCTTCAGCAGATCCTAGTTATGTTACGACCTATATAGCCCATAGTTTCCCTCAGCATAGACAGTATTTGTGTGCTGGTGCATTGATATTAATGCATGGCCATGCAGAAAACATTAACAGTGGAAACCTGGCACGCGTACTGCGGGAATTTTCTCCTGAAGAAGTGACATCTAACATTTACACAATGGTTGATGTTATGCTTCATCATATGCAAATAGAGCTTCAGCAAGGACACCTGATACAGGACCTTATGTTAAAAGCCTGTGCAAGCCTTGCCTTTTTTGTTTGGACAAATGAGTTACTTCCTTTGGATATCTTGCTTCTTGCACTTGCTGACCGTGATGATGATCCACATGCTTTGCGTATTGTGATCAGTTTGCTTGATAGGCAAGAGCTTCAACAGAGAGTAAAACTCTTTTGTATAACCCGTGGGCACCCTGAACATTGGCTTTACACAGGAATGTTCAAGCGGGTTGAGCTACAAAAGGCACTTGGAAATCATCTTTCGTGGAAGGATAGGAATCCCGTGTTCTTTGATGATATTGCGGCACGTTTGCTTCCAATCATCCCCTTAATTATTTACAGACTTATTGAAAATGATGCAATGGATACAGCAGAGAGACTATTGGCCCTATATTCTCCATTGCTTGCTTATTACCCTCTAAGATTTACTTTTGTTCGTGATATACTTGCATATTTCTATGGTCATCTTCCTGGAAAACTCATTGTTCGAATACTCAATGTACTTGACATCAGTAAGATTCCCTTTTCAGAGTCATTCCCACAGCAAATAAGTTCGTCAAATCCTGCCATGTGCCCTCCTCTGGACTATTTTACGACTCTATTGTTGGGAATAGTAAATAATGTAATTCCTCCACTACATAACAATTCAAAATCTGGACCCATAGGAGATGCATCAAACAGTGCAATGCGTACTGCACAAAACAAGCCTCCAGCAGTATCTCAGTCTGGACCAGCAAATGCTTCTGAGGCCCAAAAGGCATTCTACCAAATTCAGGATCCTGGCACATATACTCAGCTGGTTCTTGAGACTGCTGTCGTTGAAATACTTTCCCTTCCTGTATCTGCTTCTCAGATAGTACAATCACTTGTTCAAATTGTTGTTAATATACAACCAACATTGATCCAGTCCAACGATTCTCTCCACGGCTCCTCAAATGGTGTAGGGCAAGGTTCAGTGTTACCAACATCACCTTCAGGGGGAAGCACAGATTCCTTAGGTGCAAGTAGATCAACTCCTTCAATTTCCGGTGTAAATACCACTAACTTTGCTTCGCAAAGTGGTTATACAAGTCAACAACTGTCTTGTTTGTTGATTCAAGCTTGCGGCCTCCTTCTGTCTCAGCTTCCTTCTGATTTTCATGCACAACTTTACTTGGAGGCGACACGTATAATTAAAGAGAACTGGTGGCTTACAGATGTGAAAAGGTCACTCGCGGAAATTGACTCTGCTGTTGGCTATGCTTTGTTAGATCCAACATGGGCTGCACAGGACAATACCTCCACAGCCATTGGGAATGTGGTTGCCTTGCTTCATGCTTTCTTCAGTAACCTACCTCAAGAATGGCTTGAAGGGGCTAATGTTATCATCAAGCAACTTCGGCCAGTAACATCAGTTGCAATGTTGAGGATAGCATTCCGTATAATGGGCCCAGTCCTTCCAAAACTTGCCAATGCTCATGCACTTTTCAACAAGACTCTATCTATACTCTTAACCATATTAGTGGATGTATTTGGAAAGAACTCCCAGACATCAATCGCCATTGATGCATCAGAGATAGCAGACATTATTGACTTCCTTCATCATATCATTCACTATGAAGGGCAGGGAGGGCCTGTGCAGGCGAGCAGCAAACCGCGACCAGATGTTTTGGCACTCCTTGGAAGGGCGGCAGAGAGTTTACGTCCAGAATTTCAACATCTGCTCTCACACTTGAATACTGATGTGAATTCTTCTGTTTACGCGTCTTCTCACCCAAAGTTAGTCCCAAATCCAACCTAG 4842 0.4259 MDQSQNQRSLSTTTPSRSVQFHPARVPILDLFNLYLGLGRNSRNKPDDSLREPPNKTQKRVHAINRELPPPNEQFIIDFEQLQSQFPDHEQLRSVTEAMLIPLVVQCSGHGPRSDFLLFALRSLCGIGCINWDSFLPSLLSSVSSAELPVGQTSQAVSTVTSSSLSQPGMLPPQSTVANSSNFQSSNPASPLTSVHTIGSPAQSSMEPLSCAALSPVKSSDNSSAGQQSKVRGSSSVRNNDISNSSLRQLCCKIILTGLEFNLKPVTYAEIFHHMLNWLVNWDQRQQAVDESDIPKSWRPDKTVIAWLHSCLDVIWLLVDEGKCRVPFYELLRSDLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILNQTPPISSEATAHLRLSPISYLSVLGEPLHGEDITISVRKGSLDWERAVRCIRHALRTTPSPDWWRRILVLAPCYRLSSHGTTAGGVFSSEMICEATIDRIVELLKLTNSEINCWQEWLVFSDIFYFIMKSGCIDFVDFVDKLVSRLTEGDHRILRTNHVTWLLAQIIRIELVMTALNTDPRKVETTRKVLSFHREDRSSDPNSPQNILLDFVSSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQASKGDRMMDYMNMDERSIGMFWVVTYTMAQPACETVMSWLTSAGVTDLIPATNLQPTERLVGTREVSPLPMSLISGFSMNLCLKLSYQMEDSLFSGQIVPSIAMVETYSRLLLIAPHSLFRSHFNHLVQKSPSLLSKPGATLLVLEILNYRLLPLYRYQGKSKTLMYDVTKIITALKGKRGDHRVFRLAENVCLNLIFSLRDFFLVKRDGKGPTEFTETLNRVCVITLAILIKTRGIAEAEHLLYLPSMLEQIMAVGQHTWSEKTLRYFPPVLREALSGLPDKRSVAVQAWQQAETTVIHQCTQLLSPSADPSYVTTYIAHSFPQHRQYLCAGALILMHGHAENINSGNLARVLREFSPEEVTSNIYTMVDVMLHHMQIELQQGHLIQDLMLKACASLAFFVWTNELLPLDILLLALADRDDDPHALRIVISLLDRQELQQRVKLFCITRGHPEHWLYTGMFKRVELQKALGNHLSWKDRNPVFFDDIAARLLPIIPLIIYRLIENDAMDTAERLLALYSPLLAYYPLRFTFVRDILAYFYGHLPGKLIVRILNVLDISKIPFSESFPQQISSSNPAMCPPLDYFTTLLLGIVNNVIPPLHNNSKSGPIGDASNSAMRTAQNKPPAVSQSGPANASEAQKAFYQIQDPGTYTQLVLETAVVEILSLPVSASQIVQSLVQIVVNIQPTLIQSNDSLHGSSNGVGQGSVLPTSPSGGSTDSLGASRSTPSISGVNTTNFASQSGYTSQQLSCLLIQACGLLLSQLPSDFHAQLYLEATRIIKENWWLTDVKRSLAEIDSAVGYALLDPTWAAQDNTSTAIGNVVALLHAFFSNLPQEWLEGANVIIKQLRPVTSVAMLRIAFRIMGPVLPKLANAHALFNKTLSILLTILVDVFGKNSQTSIAIDASEIADIIDFLHHIIHYEGQGGPVQASSKPRPDVLALLGRAAESLRPEFQHLLSHLNTDVNSSVYASSHPKLVPNPT 1613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01190 1613 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23 45 1610 IPR021629 -
Trre1g01190 1613 MobiDBLite consensus disorder prediction 1240 1266 - -
Trre1g01190 1613 MobiDBLite consensus disorder prediction 159 239 - -
Trre1g01190 1613 Pfam Mediator complex subunit 23 495 1179 IPR021629 -
Trre1g01190 1613 MobiDBLite consensus disorder prediction 1328 1361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01190 Trre-Chr1 9020402 9037641 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01190 K15166 - gmx:100798789 2841.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01190 1 9020402 9037641 Trre1g01190 1 9020402 9037641 ECH