Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01182 ATGTTTAGATTATGCAACGTTTCTATAACCAAACCCATTTTTATTACTAATGCAACACTTCCCCAAAACTCCGATTCTTCTTCTTCTTCACCTAAACAAACCAATCTTCCTCAGAATAAAAAATCTTCACTAGGCCCCAATAAATCAGTTAATTCTTTACCTCCAAGCAATCTTCGCCGTAGACTGCCACAGCCTTCTATTATGGAGATTGAACGTTCCCTTGGCGCCGGAAGCTTCAGAGACGGCGAGGTTGACCTCAAAATGAAGGAAGATTCAGACGTAAAGAAGACCACGTCTGATTTGTTCTTGGGGCAACTATTTGAAGGAACGGTGCAGAAAAATATGAGAGAAACCGGAGAGTGGCTCGGTGAGAATGCAGAGACCATGTTTCGCTCCACTAAAACTAGAAAAGGAATTCTGCTGTTTGCTTTTCAATGGATGATGCCAATTTGGGCTATATCATTCCTAATAGCTTCTGGAGCCATCAAGCTACCCTTTAGTATCCCTTTCCTTGATGACCTCCTCATGTGA 531 0.42 MFRLCNVSITKPIFITNATLPQNSDSSSSSPKQTNLPQNKKSSLGPNKSVNSLPPSNLRRRLPQPSIMEIERSLGAGSFRDGEVDLKMKEDSDVKKTTSDLFLGQLFEGTVQKNMRETGEWLGENAETMFRSTKTRKGILLFAFQWMMPIWAISFLIASGAIKLPFSIPFLDDLLM 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01182 176 PANTHER NAD(P)H DEHYDROGENASE SUBUNIT CRR3, CHLOROPLASTIC-RELATED 1 176 IPR038931 GO:0009535|GO:0009773|GO:0010598
Trre1g01182 176 MobiDBLite consensus disorder prediction 19 59 - -
Trre1g01182 176 MobiDBLite consensus disorder prediction 19 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01182 Trre-Chr1 8978678 8980786 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01182 - - mtr:11424254 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01182 1 8978678 8980786 Trre1g01182 1 8978678 8980786 ECH