Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01151 ATGATAACACTAAAAGATCTATACACTGTCTTAACAGCAGTTGTTCCATTATATGTTGCTATGATCTTAGCCTACGGTTCCGTCCGTTGGTGGAAGATTTTTTCCCCGGATCAATGTTCCGGCATAAACCGTTTTGTCGCGGTTTTCGCCGTTCCTCTTCTTTCTTTTCACTTCATCTCAACCAATAATCCATACCAAATGAACTTCAGATTCATAGCAGCAGACACACTTCAAAAAATCATCATGTTAATCGCGCTTTCGCTATGGACAATGTTCACTAAAAATGGTAATTTAGAATGGATGATAACAATTTTCTCATTATCAACACTTCCAAATACTTTGGTTATGGGAATTCCTTTGTTAATTGCTATGTATGGTGATTACTCTGGAAGTTTAATGGTTCAAGTTGTGGTTCTTCAGTGTATCATTTGGTACACACTTTTACTCTTTCTTTTCGAGTATCGAGGTGCTAAGCTTTTAATCATGGAACAGTTTCCGGAAACTGCAGCTTCGATTGTTTCATTTAAAGTTGATTCCGATGTTATGTCGCTTGATGGAAGGGATTTTCTTGAGACTGATGCATCTGTTGGTGATGATGGAAAGTTACATGTTACTGTTAGGAAATCTAACGCGTCGCGGAGGTCATTCATGATGAATACTCCGCGACCCTCAAATTTGACTGGAGCTGAGATTTACAGTCTCAGCTCCACGCCAAGAGGGTCAAATTTTAACCATCAGGAGTTTTACTCCATGATGGGCTATCAACCAAGGCATTCCAATTTTGGTACTAATGATTTGTATTCGGTTCAGTCTTCTTCTCGAGGACCGACTCCTAGACCGTCAAATTTCGAAGAACAAGGTGGAAGTTCTCCAAGATTTGGGTTTTATCCGGCACAAACTGCCCCTGTTTCGTATCCGGTGCCTAATCCAGAATTCTCCTCTACTACTAAAACTGTTAAGAGTCAGAGCCAAAATTTGGTGCAGCCACAACAGCAGGTTTCATTGCAGACAAAGGGCTCTCAGGATGCTAAGGAATTGCATATGTTTGTGTGGAGTTCAAGTGCTTCGCCGGTTTCGGAAAGTGCTGGTCTCAATGCGTTCCGAAATTCGGAACAATCTGAGGAGGGTGCTAAAGAGATCAGGATGGTTGTTCCTGATGAACATAATCAAAATGGTGAAACCAATAACAAAGGTGGTCAAGAAGGTGAACTTGGTGGGGAAGAGGACTTCAAATTCAACGGAGTTAAGGGAGGAGAACAACTCGGAGAAGGGCCCAATGGGCCTAATAAATTGGGCTCAAATTCAACAGCAGAGATCCACCCGAAAGCCACTGGAGTTGCTGACTCCAGTGTCGGAAAACTTATGCCTCCGGCGAGCGTCATGACCCGACTCATACTCATTATGGTTTGGAGGAAACTTATCCGTAATCCCAACACTTATTCAAGTCTCATCGGTCTCATTTGGTCCCTTGTTTCCTTTAGGTGGGATGTTCATATGCCTAAAATAATAGAGAAATCAATTTCCATACTGTCTGATGCTGGTCTTGGAATGGCTATGTTCAGCTTAGGTTTGTTTATGGCTCTTCAACCCAAGATAATTGCATGTGGGAATTCTATAGCTTCATTTGCAATGGCCATTAGATTCCTTACTGGTCCAGCTGTTATGGCAGCAGCTTCTATCGCTGTTGGCCTCCGTGGCACCCTCCTACATGTTGCCATTGTTCAGGCTGCACTTCCACAAGGGATTGTTCCATTTGTGTTTGCAAAAGAGTACAATGTCCATCCAGCCATTCTTAGTACAGCGGTTATTTTTGGGATGTTGATAGCCCTTCCAATTACTCTTCTCTACTACATTCTCCTTGGTTTGTAA 1869 0.4238 MITLKDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAVFAVPLLSFHFISTNNPYQMNFRFIAADTLQKIIMLIALSLWTMFTKNGNLEWMITIFSLSTLPNTLVMGIPLLIAMYGDYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVMSLDGRDFLETDASVGDDGKLHVTVRKSNASRRSFMMNTPRPSNLTGAEIYSLSSTPRGSNFNHQEFYSMMGYQPRHSNFGTNDLYSVQSSSRGPTPRPSNFEEQGGSSPRFGFYPAQTAPVSYPVPNPEFSSTTKTVKSQSQNLVQPQQQVSLQTKGSQDAKELHMFVWSSSASPVSESAGLNAFRNSEQSEEGAKEIRMVVPDEHNQNGETNNKGGQEGELGGEEDFKFNGVKGGEQLGEGPNGPNKLGSNSTAEIHPKATGVADSSVGKLMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVSFRWDVHMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSIASFAMAIRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLLYYILLGL 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01151 622 MobiDBLite consensus disorder prediction 385 437 - -
Trre1g01151 622 MobiDBLite consensus disorder prediction 311 331 - -
Trre1g01151 622 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 622 - -
Trre1g01151 622 MobiDBLite consensus disorder prediction 261 288 - -
Trre1g01151 622 Pfam Membrane transport protein 9 617 IPR004776 GO:0016020|GO:0055085
Trre1g01151 622 NCBIfam auxin efflux carrier 1 622 IPR014024 -
Trre1g01151 622 MobiDBLite consensus disorder prediction 261 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01151 Trre-Chr1 8769728 8774281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01151 1 622 Organic Solute Cotransporters AT1G70940 75.272 0.0 916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01151 K13947 - gmx:100791394 962.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01151 1 8769728 8774281 Trre1g01151 1 8769728 8774281 ECH