Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01061 ATGGATATTGCTCATTTTGTATTCGGCTTATTTGGAAATGCTTTTGGTCTTTTTCTCTTCTTGGCTCCAATAATCACTTTCAAGAGAATTATTGTGAACAAATCAACAGAGAAATTCTCAGGTGTTCCTTACACAATGACACTTCTCAACTGTCTTCTTTCTGCTTGGTATGGATTACCATTTGTGTCACCAGACAACTTACTTGTAACAATCATCAATGGAGCAGGAGCAGTGATTGAAATCATATATGTTTTCACTTTTATCTTGTTTGCACCTAAAAAGGAGAAGTTGAAAATAAGTGGCTTATTTTCAATTGTGTTAACAATTTTCTCAGCTGTTGTTTTCATCTCTCTGTTTGCTCTGCATGGTAATTCAAGGAAAGTGTTTTGTGGTTTTGCTGCTGCAATATTTTCCATCATTATGTATGGTTCACCACTCTCAATTATGAGATTAGTGATCAGAACCAAAAGTGTGGAGTTCATGCCATTCTTCCTTTCACTATTTGTGTTTCTTTGTGGTACATCATGGTTTGTCTTTGGTCTATTAGGCCGTGACCCATTTATTGCAGTACCAAATGGTGTAGGGTCAGCATTAGGGACATTGCAACTAATATTGTATTTCATATATCGTAAAAATAAAGGGAATAATGCAAAAACAAAAACAACTACAACACAAGAAGAATCAATGGAAATGGGCACCGCAAAACCATCCAAAAATGTAATGGGAAATGAAGAACTCAAAGGGGACACGTCTTAG 756 0.3585 MDIAHFVFGLFGNAFGLFLFLAPIITFKRIIVNKSTEKFSGVPYTMTLLNCLLSAWYGLPFVSPDNLLVTIINGAGAVIEIIYVFTFILFAPKKEKLKISGLFSIVLTIFSAVVFISLFALHGNSRKVFCGFAAAIFSIIMYGSPLSIMRLVIRTKSVEFMPFFLSLFVFLCGTSWFVFGLLGRDPFIAVPNGVGSALGTLQLILYFIYRKNKGNNAKTKTTTTQEESMEMGTAKPSKNVMGNEELKGDTS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01061 251 Pfam Sugar efflux transporter for intercellular exchange 130 213 IPR004316 GO:0016020
Trre1g01061 251 Pfam Sugar efflux transporter for intercellular exchange 7 94 IPR004316 GO:0016020
Trre1g01061 251 Gene3D - 127 223 - -
Trre1g01061 251 FunFam Bidirectional sugar transporter SWEET 126 219 - -
Trre1g01061 251 MobiDBLite consensus disorder prediction 218 232 - -
Trre1g01061 251 PANTHER RAG1-ACTIVATING PROTEIN 1 15 221 IPR047664 -
Trre1g01061 251 Gene3D - 6 96 - -
Trre1g01061 251 MobiDBLite consensus disorder prediction 218 251 - -
Trre1g01061 251 FunFam Bidirectional sugar transporter SWEET 7 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01061 Trre-Chr1 8013161 8015449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01061 1 190 Miscellaneous Gene Families AT1G21460 75.789 2.14e-104 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01061 K15382 - gmx:100800304 366.696