Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01054 ATGGCCTCAACTCAACCCAACTTCTACTTTCCACACCCCCTCGACCCACCACCTTCCCACCCCTTCAACCCACCACCCTCCCACCCTCTCTATCCACCACCATCACCTTTCCACCCTTTCAACCCTCCACCACCTCATTCCTTAATATCTCCACCACCACCTCATTCACTTCCTCCTCCACCGCCACACGGACACCCTCCACGACCTCCGCCACCATCTCATCCATTTTCTCCTCCACCACCACATGTCCATCCCCCACCGTCTCCACATCACCCCATTGCTCCTCCTCTACCGCCGCATGTCCATCCATCACCACCACCACCATTTCCACCTTCTCCCACTCCATACCATCCAACAGTCATTGTCATTGTGATCATCGGATTTGGTGGCATTGCCTTGCTTTCCTTGCTTGCTTTTGCATTATTTTGTTGCGTTCAAAAGAGGAAGAAGAAGACGACGCAAGGAACCGATATTGTTCATATCGATGAACATAAAAAGGTTACGGAAACAATTATTCCTGGTCCTTCCGGACAACCACCAACCGTGGTGATATCAGTCGAAGATGATGTTCATATTGATGAAGTAATTAAGAAGAATGAAGAAGTTGGTCATGATTTACATGCTGAACCATCAAAAGTTGAATCAAATCAAGACAATATTTCTAGTAGCAATGAAGTGGCAACTGCATCTTCTCCTAGTCATGAACATCATCATATTCATCCACAAAGTGAGAACAAGCCTTGA 744 0.4731 MASTQPNFYFPHPLDPPPSHPFNPPPSHPLYPPPSPFHPFNPPPPHSLISPPPPHSLPPPPPHGHPPRPPPPSHPFSPPPPHVHPPPSPHHPIAPPLPPHVHPSPPPPFPPSPTPYHPTVIVIVIIGFGGIALLSLLAFALFCCVQKRKKKTTQGTDIVHIDEHKKVTETIIPGPSGQPPTVVISVEDDVHIDEVIKKNEEVGHDLHAEPSKVESNQDNISSSNEVATASSPSHEHHHIHPQSENKP 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01054 247 MobiDBLite consensus disorder prediction 213 230 - -
Trre1g01054 247 MobiDBLite consensus disorder prediction 200 247 - -
Trre1g01054 247 MobiDBLite consensus disorder prediction 10 110 - -
Trre1g01054 247 MobiDBLite consensus disorder prediction 231 247 - -
Trre1g01054 247 MobiDBLite consensus disorder prediction 1 110 - -
Trre1g01054 247 PRINTS Proline rich extensin signature 42 54 - -
Trre1g01054 247 PRINTS Proline rich extensin signature 5 17 - -
Trre1g01054 247 PRINTS Proline rich extensin signature 21 37 - -
Trre1g01054 247 PRINTS Proline rich extensin signature 60 81 - -
Trre1g01054 247 PANTHER OS08G0108300 PROTEIN 51 239 IPR044950 GO:0009834
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01054 Trre-Chr1 7977275 7978018 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01054 - - lja:Lj0g3v0299789.1 137.117