Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01031 ATGGCAGAAAGCCTTCGTATGGCTGTTGCAGTTATTGGAAATGTTGCCTCAGTGTCCCTTTATGCTGCACCAATGGTTACTTTCAAAAGGGTCATAAGGAAAAAAAGCACTGAGGAATTTTCATGTGTTCCTTATATTATTGCACTATTGAACTGTCTCCTTTTTACTTGGTATGGATTGCCAATAGTTAGCTACAAGTGGGAAAATTTTCCTCTTGTTACTGTTAATGGAGTTGGAATTGTTTTGGAGCTAGCTTATGTTCTAATTTATTTTTTGTATTCTACACCCAAAGGAAAGGTGAAGGTAGCTATGATAGCTTTACCAGTTCTTCTATCGTTCTGTGCCATTGCTCTTGCATCAGCTTTTGCCTTCCCTGATCATCGTCACAGAAAGTTACTTGTTGGTAGCATTGGTTTGGGGATTTCAATAGCAATGTATGCTTCCCCTTTGATTGTTATGAAGAAAGTGATACAAACAAAGAGTGTGGAATTCATGCCACTACCCTTATCATTGTGTTCATTCTTAGCTAGTGTATTGTGGCTTACATATGGACTTCTCATTAGGGATATATTCGTTGCGGGACCAAGTGTGATTGGAACTCCCTTAGGAATCCTCCAGCTGGTTCTCCACTGTAAATATTGGAAAAGAAAAGTTGTTATTGAAGAACCAAACAAAGTGGATCTTCATAAGCTGGGAAACCTAGAGAATTTGGACATGGAAAAGGGTGGTTTAGAAAAAGGGAAACTTGGAAAAGAATGTGACAAAACCACAACTTGTGATGTGTGA 786 0.3868 MAESLRMAVAVIGNVASVSLYAAPMVTFKRVIRKKSTEEFSCVPYIIALLNCLLFTWYGLPIVSYKWENFPLVTVNGVGIVLELAYVLIYFLYSTPKGKVKVAMIALPVLLSFCAIALASAFAFPDHRHRKLLVGSIGLGISIAMYASPLIVMKKVIQTKSVEFMPLPLSLCSFLASVLWLTYGLLIRDIFVAGPSVIGTPLGILQLVLHCKYWKRKVVIEEPNKVDLHKLGNLENLDMEKGGLEKGKLGKECDKTTTCDV 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01031 261 FunFam Bidirectional sugar transporter SWEET 7 99 - -
Trre1g01031 261 Gene3D - 7 97 - -
Trre1g01031 261 PANTHER RAG1-ACTIVATING PROTEIN 1 16 223 IPR047664 -
Trre1g01031 261 FunFam Bidirectional sugar transporter SWEET 130 222 - -
Trre1g01031 261 Gene3D - 132 226 - -
Trre1g01031 261 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016020
Trre1g01031 261 Pfam Sugar efflux transporter for intercellular exchange 9 97 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01031 Trre-Chr1 7780243 7782832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01031 1 247 Miscellaneous Gene Families AT5G53190 53.906 2.86e-97 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01031 K15382 - gmx:100785477 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01031 1 7780243 7782832 Trre1g01031 1 7780243 7782832 ECH