Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00986 ATGTGGGGGTGGGTGGGGGTGATATTGGTACTACTGCTACCGTTTTCCTATTGTGCTAGTAGTACTTTTGAGCAAGAGCATACATGTCCACCTTCATCTTGTGGGAAAATTTCCAACATAAGTTATCCATTTCGATTAAGAGATGACCCATCTCATTGTGGGGATAGCAGGTATGAACTATCTTGTGAAAATAATGTGACAACTTTATATTTATACTCTGCAAAATATCATGTGCAGTACATCAACTACAACAATTTCACAATCCGAGTAGCTGATCCTGGAGTTCAACAAGATAATTGCTCTTCACTACCTCGTTATTTCTTGTCCAGCTCTGATTTCTTTGATACCGACAATGGAAAAGACCTATACCATGCCAATTCCAATGAAGAACGGGATCCTGGCACGGGAGAGGATTACCTTTTCAAGCATATAGTATACTTGAATTGTAGCCATCAAGTTACTAACGATCCTAAATATGTTGATACTACTACTTGTGTTAATTGGAACTCCAAAGGCCATTATATTTATGCTATGGCTGGTGATTTGATTGCTGAAGATTTTCAAGTTGGTTGTCATGTGAAATTAGTTACTCCCACATCTTGGTTCTGGGGTTTGAAAAGAAATGAAGTAGTTTCTTATGATGCAATGCACAAGGCTTTAGTGTATGGATTTGAGATTTCATGGTTGCATCTTATCTGTCGTCATCGTTGTGGACCTTCAGCGTTCTGTACCTTCAATTCCACTGAGGAATTTGAATGCTTTAAGGACAGGTGCCTCTCTTTTATAGGATTATCGATGAATGATAATTGTGGGAAATGGTCTCAGATTGTTTTAGCATCTAAAGAAACCATCAAAGCTTTCTGGAAAGGTATTGTTGAAATAATAAAAGGACCAAAGTCAAACCACGAAGGAGATATTGAAAGCATTGAAATGCCTCCGGAGCCAACTATATATTCAGATGAAATAATTTCAAGAGATGAAACAATCAACTCAGATCAACCAATATCAAGTGATTTCATTAGTTCTAGCGATTCTGGGGAAAACATGAGTAATCCTCTACTGGAAAATATTTCTTGA 1077 0.376 MWGWVGVILVLLLPFSYCASSTFEQEHTCPPSSCGKISNISYPFRLRDDPSHCGDSRYELSCENNVTTLYLYSAKYHVQYINYNNFTIRVADPGVQQDNCSSLPRYFLSSSDFFDTDNGKDLYHANSNEERDPGTGEDYLFKHIVYLNCSHQVTNDPKYVDTTTCVNWNSKGHYIYAMAGDLIAEDFQVGCHVKLVTPTSWFWGLKRNEVVSYDAMHKALVYGFEISWLHLICRHRCGPSAFCTFNSTEEFECFKDRCLSFIGLSMNDNCGKWSQIVLASKETIKAFWKGIVEIIKGPKSNHEGDIESIEMPPEPTIYSDEIISRDETINSDQPISSDFISSSDSGENMSNPLLENIS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00986 358 MobiDBLite consensus disorder prediction 328 358 - -
Trre1g00986 358 MobiDBLite consensus disorder prediction 327 358 - -
Trre1g00986 358 PANTHER OS01G0690200 PROTEIN 9 258 - -
Trre1g00986 358 Pfam Wall-associated receptor kinase galacturonan-binding 29 92 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00986 Trre-Chr1 7471236 7475747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00986 8 271 Receptor kinase-like Gene Family AT5G38260 20.727 3.85e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00986 - - tpra:123893257 380.563