Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00945 ATGGGTTTGATATGGTGGATTTTAGGCATAATTCACATACTTCCACTATTCATAGATTCAATCTATAGCCTAACCCCACAATCACCAATCCAATGCAACCAAACAATCTGCACCTTAAAAAACTCCTATGGAACATGGAACGACCGCAAAAACTGTTATGCAATCAATGTAACATACCCAACAACAGAAGAACAACTTCGTTTAGCAGTTTCCTATGTTGTTCAAAACAACCTTAAAGCCAAAATTGTCACAAAATTCTCACACACAATCCCAACACTTTCATGTCCACAACAAAAAAATAAAAATAATGCCTTTTTTATTAGCACAGAAAAATATGATTCTGAGATTCAAATTGATGCTACCAATTTGGCTGTAACTGTTGATTCAGGTGTGAAACTTCGTCAATTGATTGATGAAGTTGAAAAAAATGGGTTTAGTTTGGTGGCTGCACCTTATTGGGAAGGTGTTACAATTGGGGGTGTAATTAGCACTGGTGCACATGGTAGTTCTTGGTGGGGTAAAGGTGGTGCTTTTCATGATTATGTTTTAGGGATTAATATTGTTGTTCCTGGTTCTAAATCTGAAGGGTATGCTAAAATTTTGAAGTTGGATGCACATCATCCTTTCTTTAATGCTGCCAAAGTTTCTCTTGGAGTTTTGGGTGCCATCTCCAAGGTAAAGTTATCTCTTGAGCATAGGTTCAAAAGAAGCATAACATTCAATTTCACCGATGATACTGATATTGAAAATGTGTACATAGAACATGCAAAGAAGTATGAATTTGCAGATATAACTTGGTATCCATCAAGACATACAGCTGTTTACAGATATGACTTCAGGGTTCCATTAGATACCTCTGGTGATGGAGTCTACGATTTCATTGGATTTCAAGCCAATAACATCTTAATCTCTGAGTCTGTTAGAGCAGCAGAGAAATTGCTAGAAAACATAGGAAACACAAATGGAAAATGTTTGACAGCATCTACAACATTGGCATTCAAGAAATTAACAGCCAATGGTTTAAAGAACAATGGCTTAATCTTCACTGGCTACCCTGTAATTGGTTACCAAGGAAAATTACAAACTTCAGGTTCATGCTTATATTCATCAAAAATAGACACATCATGTGCTTGGGATCCAAGAATCAAAGGATTGTTCTTCTATGAATCAACAGCAATTTTCCCTGCTTCAAAATTTGGAAACTTCATTCAAGATGTGAAAAAACTAAGAGATATAAATCCACAAAATTTTTGTGGTATAGATAACTATAATGGAATTATGATACGTTACATTAAAGCCTCAGAAGCATATCTAGGACAATCAGAAGATTCTATAGTGATTGATTTCAATTATTATAGAGCAAATGACCAATTTACCCCTAGATTAAATCAAGATGTGTGGGAGGAATTGGAACAAATAGCATTTTTCAAGTATGGTGCAAAGCCACATTGGGCTAAGAATAGGAACTTAGCATTTTTAAATGTGAAAAATAAATATCCTAAGTTTAATGTTTTTATTGATGCTAAAAATAAAATGGATCCACAAAATGTGTTTTCTGGTGATTGGTCAGATGAGATTTTGTATGGTAAGGAATTGGTAAAATTTGATGGTTGTGCTTTGGAAGGACAATGTATTTGTTCTGAAGATAGACATTGTAGTCCACAAAAAGGGTATTATTGTAATCATGGTCTTGTTTACAAGGATGCTAGAGTTTGTAAGAATTTGTCAACTTTTGTGAACACTGATTCACTCCAATGA 1758 0.3458 MGLIWWILGIIHILPLFIDSIYSLTPQSPIQCNQTICTLKNSYGTWNDRKNCYAINVTYPTTEEQLRLAVSYVVQNNLKAKIVTKFSHTIPTLSCPQQKNKNNAFFISTEKYDSEIQIDATNLAVTVDSGVKLRQLIDEVEKNGFSLVAAPYWEGVTIGGVISTGAHGSSWWGKGGAFHDYVLGINIVVPGSKSEGYAKILKLDAHHPFFNAAKVSLGVLGAISKVKLSLEHRFKRSITFNFTDDTDIENVYIEHAKKYEFADITWYPSRHTAVYRYDFRVPLDTSGDGVYDFIGFQANNILISESVRAAEKLLENIGNTNGKCLTASTTLAFKKLTANGLKNNGLIFTGYPVIGYQGKLQTSGSCLYSSKIDTSCAWDPRIKGLFFYESTAIFPASKFGNFIQDVKKLRDINPQNFCGIDNYNGIMIRYIKASEAYLGQSEDSIVIDFNYYRANDQFTPRLNQDVWEELEQIAFFKYGAKPHWAKNRNLAFLNVKNKYPKFNVFIDAKNKMDPQNVFSGDWSDEILYGKELVKFDGCALEGQCICSEDRHCSPQKGYYCNHGLVYKDARVCKNLSTFVNTDSLQ 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00945 585 Pfam D-arabinono-1,4-lactone oxidase 426 524 IPR007173 GO:0003885|GO:0016020
Trre1g00945 585 FunFam L-gulonolactone oxidase 2 389 489 - -
Trre1g00945 585 Gene3D - 389 489 - -
Trre1g00945 585 FunFam L-gulonolactone oxidase 5 114 232 - -
Trre1g00945 585 NCBIfam FAD-dependent oxidoreductase 26 573 IPR010030 -
Trre1g00945 585 Gene3D - 114 231 IPR016169 -
Trre1g00945 585 Pfam FAD binding domain 57 190 IPR006094 GO:0050660
Trre1g00945 585 SUPERFAMILY FAD-binding/transporter-associated domain-like 40 230 IPR036318 GO:0050660
Trre1g00945 585 ProSiteProfiles PCMH-type FAD-binding domain profile. 50 233 IPR016166 GO:0071949
Trre1g00945 585 PANTHER GULONOLACTONE OXIDASE 31 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00945 Trre-Chr1 7193732 7197264 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00945 K00103 - gmx:100778616 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00945 1 7193732 7197264 Trre1g00945 1 7193732 7197264 ECH