Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00939 ATGTCCCCCGACGCCGTCGGCAACGGAGCTCTGATCCCATTCTCCGGCGACACCAACGATTCACTCGCAGTTTATCCTCTCCACCATGGTCTCGCCTGTCCAATTTCTCGATTAGCTCTCTCCTGGTCCCGTGGAAACTCCCTCCGCGTTTCCCTTTTCGCGGAACCTTCTGGAAGTTCCGATGTCGGAGATGGTGCAAAGGTTATTGAAGTTAAGCTCGGTGGTGGAGATCCGGAAATTGATGATGCTGACTGGCGAAGAATTGCTTATGGCTCTGTTGCACCCTTTGCGTTGCTTCAAAGTCGCCGGAACTCTCTTTCTGCATTGTCAAAATCTCCGTATCATTTAGATTGGTGGGAGCATGTCCTTCAGTATAGCAAGGATATAACATCGCTTCTTGCAGGGCCAAAGTTGGCTCCTAATCCAATAATCGAAGATCCGAATGAAATTGTTAAGAAAAATGAGGAGCCTACATGTTTGAAAGCTGCATGGGAGTTGATGGAAATATTTTATGTGGACAAGCAATCTCAAGCATGGCTACCCGAAAGGCTTGTTGATTGGTTAGCTGATTATGATAGCCTCTTTACTAGTACACAGGAAACAATTCATGGCAAGCTTGTGGATTTTCAGAATGATCTTGTCAATATACAGGTGATTGAAGATGATCCTAGATATTGGGAAGTGATGTCATCTGCATTGTCAGTTGGTTGGCTAGATATAGTGGTGAAAATGCTGCGGTTGCATGGATCTTACCAAATAGATCAGCTCAGTAAGCGTGAGTTAGAAAATGGATTAGTGGAGGCAGTTGCTGTTCTTATTTCCAAAATGCCCCGATTACGTCATGAATCTGCTGTTGGAAATTTAGGAGAGTGCTTTAAATCCAAGCCTGACTTTACCAAAGCCTGGGAAAAATGGAGGTCACAAATTACTAAATTGGACTGCAGTCCATATTGGATTCAGTGTGATAATCAACAAACTTGTGAGGGCTTAAGAAACATGCTACAAGTTATGCTTGGTAACACCGAGAGTCTCTGTACAGCTTCATGTTACTGGGTTGAGTTGTACGTTTCTCATTTTTTATACATCAGGCCATTTACGACTGGAATAGAAAGCATGTATAATTTGGCCCAAAAATGCATGCAATTGAAACCACCGACTGGTACCCATAGGTTGACTGGTCTTATGATTGGAATTCTTGGAGAAAATACGGAGGTTGTTTTAGCTGAAATTTCCAGAGAATTCGGTCCTTGGATGGTTGCACATGCCGTGGAATTGCTAACTGCAGGGAGTGAGCAGGCAGAGAGTCTTCTACATGATGAACGTTATAACTTGGGGGGAATCAGTATGGTGGAACTTCATCGGCTTGCATATGCTCAAGTTCTATCATCACATGCATTGACTTGGCAAATAGCTCCAATATATTTAACATCATGCACGAAGCAAGGAATGGGCTTGCTAGAGAATTTGTTGTACAGACAATCTGTTCAACATAACAACCTGTTGCTTAAGAACATCGAGATATGCCGTTTGTATGAGCTTGATCATATCAGTTCAAATATCATGAAGGTTGCTGGGGTCTATCACTGGAAGCATGGTCGTAAAGGTACTGGAGTATTTTGGCTTCAACAATCCCAAGATACAAACTGTCTTGATAGGATTGCACAACAGTTATTTGATTCAGTTGGAAAGTCAATTTCTGACGAAAGCTTCAAACAATGGGAAGGCTTAATTGAGTTATTGGGTTCTGAATCTAAACCTGCTGGGGGTCTTGAGTTTTTACACAAGTATAGAGATTTCAAAAAATCCCTTCAGATGGTATATAGTGGAAAATCGGCTGATGCTGCAAGACAAGCTGTAGGCTCCCTCATACTGCTTATGAAAAATCCATCAACCCCTCAGCGCTTTTGGCTGCCCCTTCTGTTTGACTCGTTGAAGTTGCTTAATTGGAAAGATGGTCCTCTTCTCAGTGTGTCTGAGACCCATCTTCTATTGAATAAACTTCAAGAATTATCTTTGGCGAAGCAGCGCCCACACTTCGCTGAGCCTAACTTACCCCCTCAAGCACTGAGTTCTATTAGGCTGGCTCTAGCCACAAATCTTGGTCGTGCTATACTCGACGAATAG 2124 0.4313 MSPDAVGNGALIPFSGDTNDSLAVYPLHHGLACPISRLALSWSRGNSLRVSLFAEPSGSSDVGDGAKVIEVKLGGGDPEIDDADWRRIAYGSVAPFALLQSRRNSLSALSKSPYHLDWWEHVLQYSKDITSLLAGPKLAPNPIIEDPNEIVKKNEEPTCLKAAWELMEIFYVDKQSQAWLPERLVDWLADYDSLFTSTQETIHGKLVDFQNDLVNIQVIEDDPRYWEVMSSALSVGWLDIVVKMLRLHGSYQIDQLSKRELENGLVEAVAVLISKMPRLRHESAVGNLGECFKSKPDFTKAWEKWRSQITKLDCSPYWIQCDNQQTCEGLRNMLQVMLGNTESLCTASCYWVELYVSHFLYIRPFTTGIESMYNLAQKCMQLKPPTGTHRLTGLMIGILGENTEVVLAEISREFGPWMVAHAVELLTAGSEQAESLLHDERYNLGGISMVELHRLAYAQVLSSHALTWQIAPIYLTSCTKQGMGLLENLLYRQSVQHNNLLLKNIEICRLYELDHISSNIMKVAGVYHWKHGRKGTGVFWLQQSQDTNCLDRIAQQLFDSVGKSISDESFKQWEGLIELLGSESKPAGGLEFLHKYRDFKKSLQMVYSGKSADAARQAVGSLILLMKNPSTPQRFWLPLLFDSLKLLNWKDGPLLSVSETHLLLNKLQELSLAKQRPHFAEPNLPPQALSSIRLALATNLGRAILDE 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00939 707 PANTHER FROUNT PROTEIN-RELATED 37 707 IPR011502 -
Trre1g00939 707 Pfam Nup85 Nucleoporin 79 669 IPR011502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00939 Trre-Chr1 7113805 7123768 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00939 K14304 - gmx:100785741 1184.47