Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00848 ATGGGGTTGGGAAACCTATACAGAAGACGTGTAAGAGTATTTACAATGGCCATTGTAGTATACCTAGATTATAAGGGTGTACAACAAAAAGAGAAATGGGTTAGCAAGTCTAAACAAGCTGCAATGTGGGAGAAGGCACATGAGAGGAATGCTAAACGAATTCTAAAACTGATAATAGAGATGGAAGGCTTGTGGGTGAAACTTGGGCAATATATGTCAACGCGTGCGGATGTTCTTCCTCCAGCTTATATAAATAATTTGAAGCAGTTACAGGACTCCCTTCCTCCGCGACCCTTGGAAGAGGTCTATGGCACCATACAAAAAGAGTTGGGGAAATCAATGGATGAGCTATTTTTGGATTTTGTCAATGAACCTTTGGCAACAGCATCAATAGCCCAAGTCCACCGTGCAACTCTGCTCAATGGACAGGATGTGGTTGTTAAGGTTCAACACGATGGCATCAAGACAGTCATACTGGAGGACTTGAAAAATGCGAAGTCAATTGTTGACTGGATTGCATGGGCTGAGCCACAGTATAACTTTAATCCTATGATTGATGAATGGTGCAAAGAAGCTCCTAAAGAACTTGACTTCAATCTTGAAGCTGAAAACACTAGGACTGTAGCAAAAAATCTTGGCTGCAGAAACCAACATGATGGAAGTGTGAATCCCAATAGAGTGGATGTTTTAATTCCTGATGTAATTCAGGCTACAGAAAAAGTCCTTATTTTAGAGTATATGGATGGTATTCGGTTGAATGATTTAGAATCCCTAGAAGCATATGGAGTAGATAAACAAAAGATTGTTGAGGAGATTACTCGTGCCTATGCCCACCAAATATATATTGATGGGTTTTTCAATGGTGATCCTCATCCAGGAAACTTTCTTGTGAGCAAGGAATCTCCACATCGTCCCATTTTACTTGACTTTGGACTTACGAAGAAACTTTCAAGCACCATTAAGCAAGCACTTGCGAAGATGTTTTTGTCATCTGTTGAGGGGGACCATGTGGCCCTTCTGTCCGCCTTTGCAGAAATGGGGCTTAAGCTGCGTCTGGACATACCAGAGCAGGCAATGGAGGTGACAGCTATATTTTTCCGTGCAACAACACCAGCAAGAGAATCAATGGAAACAATGAAATCTCTAGATGATAAAAGAAAAACCAATATGAAGGTTATACAGGAGAAAATGAACCTCAACCAAAAAGAAATGAAACGCTTTAATCCTGTTGATGCATTTCCTGGTGATATTGTAATATTTGGAAGGGTTCTTAATCTTCTAAGAGGACTTTCTGCCACCATGAACGTTACCATAGTATATATGGACATAATGAGGCCATTTGCAGAATCTGTTTTGAGTGGGTTTATTAGTAGAGGACCATCGGTAAATGATAGATGGGTTTTTGATTCCCCGGTTCATTCTGATGTTGAAGCCAAGCTGAGGCAACATTTAATTGAGCTGGGAAACAATGATAAAATACTTGGAATCCAGGTGTGCGCCTACAAAGATGGAGAGGTCATTATTGACACTGCTGCTGGAGTGCTCGGAAAATATGATCCCCGTCCAGTTAAACCTGATAGTCTTTTTCCAGTGTTTTCTGTTACAAAGGGTATCACAGCCGGAATGGTACATTGGCTGGTTGACAATGGAAAACTAAACCTTGAAGAGAATGTTGCAAATATTTGGCCATCGTTTGGATCACATGGGAAAGAAGTCATTAAGGTTCATCATGTGCTTAACCACACATCTGGTTTGCATAGTGCAATGGCAGACATGAGTCAAGAAAACCCTCTTCTAATTTTAGATTGGGATGAATGTTTAAAACGCATTTGTATTTCGGTGCCTGAGACTGAACCAGGAAAGGTGCAGAGTTATCATTATTTGTCATTTGGCTGGTTGTGCGGTGGAATTATTGAGCATGCATCGGGAAAGAAATTTCAGGAGATCCTTGAAGAATCAATAGTTCGTCCCCTCCAGATTGAAGGAGAACTATATATAGGAATTCCCCCAGGGGTGGAATCACGTCTTGCAGCTCTAACTGTAGATACAGATGATTTAAGCAAGCTTGCGGCAATCGGTAATCGTCCTGACCTGCCCTCCACCTTCCAGCCACAACAGATTGCTCAATTTGCAACCACTTTACCTCCTCTTTTCAATACACTTAATGCTCGGCGAGCCATCATACCTGCTGCAAATGGTCATTTATCTGCTAGGGCACTTGCACGTTACTATGCTGCCCTAGCTGATGGTGGCAAGATACCACCACCTCATTCTTCTTCTTCTAAGCCAATACTTGGAAGTCATCCCCATATTCCCAAATTATCTTCGCCGAAAGCCCCCAAAAAGAGGAAATGTATTGGAACTTTACCTACAATTAACAAAAGTTATGATAAAGTCCCTAGCAAAGAAGATTCTGAGATTACAGAAGGCAGAAACAATAGAGAGAGTAGTGCTAGTGATGATGTCGGTAGTAGCAATGTGGATAGTAATCTACGAACCCATGTTTCTGGTACGGTCTATCGGAATCCTAGGATTGTAGACGAGTTCTTGGGTACAGGAGAGTACGAGAACTTAACTTTACCAGGTGGTGGTTTTGGCTTAGGATTTAAGCGGTTTAGTTCTAAAGATGGATCAACCATCGCCTTTGGTCACTCGGGAATGGGTGGGTCTACAGGGTTTTGTGATGTTACTAACAGATTTTCTATTGCTGTGACACTAAACAAAATGTCATTTGGAGGTGTCACCGGAAAAATTGTCCAACTTGTTTGTTCAGAGTTAAACATTCCTGTGCCTGACGATTTCTTAAGATACGCAGTTCAGCAACAGGGAGATGCAATTCAGAGGCCTATGATTAATTGA 2859 0.4152 MGLGNLYRRRVRVFTMAIVVYLDYKGVQQKEKWVSKSKQAAMWEKAHERNAKRILKLIIEMEGLWVKLGQYMSTRADVLPPAYINNLKQLQDSLPPRPLEEVYGTIQKELGKSMDELFLDFVNEPLATASIAQVHRATLLNGQDVVVKVQHDGIKTVILEDLKNAKSIVDWIAWAEPQYNFNPMIDEWCKEAPKELDFNLEAENTRTVAKNLGCRNQHDGSVNPNRVDVLIPDVIQATEKVLILEYMDGIRLNDLESLEAYGVDKQKIVEEITRAYAHQIYIDGFFNGDPHPGNFLVSKESPHRPILLDFGLTKKLSSTIKQALAKMFLSSVEGDHVALLSAFAEMGLKLRLDIPEQAMEVTAIFFRATTPARESMETMKSLDDKRKTNMKVIQEKMNLNQKEMKRFNPVDAFPGDIVIFGRVLNLLRGLSATMNVTIVYMDIMRPFAESVLSGFISRGPSVNDRWVFDSPVHSDVEAKLRQHLIELGNNDKILGIQVCAYKDGEVIIDTAAGVLGKYDPRPVKPDSLFPVFSVTKGITAGMVHWLVDNGKLNLEENVANIWPSFGSHGKEVIKVHHVLNHTSGLHSAMADMSQENPLLILDWDECLKRICISVPETEPGKVQSYHYLSFGWLCGGIIEHASGKKFQEILEESIVRPLQIEGELYIGIPPGVESRLAALTVDTDDLSKLAAIGNRPDLPSTFQPQQIAQFATTLPPLFNTLNARRAIIPAANGHLSARALARYYAALADGGKIPPPHSSSSKPILGSHPHIPKLSSPKAPKKRKCIGTLPTINKSYDKVPSKEDSEITEGRNNRESSASDDVGSSNVDSNLRTHVSGTVYRNPRIVDEFLGTGEYENLTLPGGGFGLGFKRFSSKDGSTIAFGHSGMGGSTGFCDVTNRFSIAVTLNKMSFGGVTGKIVQLVCSELNIPVPDDFLRYAVQQQGDAIQRPMIN 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00848 952 PANTHER ABC1 FAMILY PROTEIN 9 669 - -
Trre1g00848 952 SUPERFAMILY beta-lactamase/transpeptidase-like 475 757 IPR012338 -
Trre1g00848 952 MobiDBLite consensus disorder prediction 754 829 - -
Trre1g00848 952 MobiDBLite consensus disorder prediction 797 816 - -
Trre1g00848 952 Gene3D - 834 927 IPR012338 -
Trre1g00848 952 Gene3D - 475 779 IPR012338 -
Trre1g00848 952 Pfam ABC1 atypical kinase-like domain 89 340 IPR004147 -
Trre1g00848 952 CDD ABC1_ADCK3-like 89 343 - -
Trre1g00848 952 Pfam Beta-lactamase 483 756 IPR001466 -
Trre1g00848 952 SUPERFAMILY Protein kinase-like (PK-like) 91 313 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00848 Trre-Chr1 6434674 6442943 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00848 K08869 - gmx:100802638 1628.22