Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00839 ATGTTTGCTTTTTCTGCTTCTTCATTTCTTCCTATGAACAGAAAGATGACGGAAAACCCACGCGACGGCGCCGGGAACCGACGCACACGATCACAAGCAGCTCCGGAGTGGACTGTAACAGAATCACTCATTCTCGTCAACGAAATCGCTGCGGTGGAAGCCGACTGTTCCGTTGAGTTTTCATCTTACCAGCAATGGGACATCATATCGGAAAACTGTGCCGCCTTAGACGTCGATCGGAACTTAGCTCAGTGTCGTCGGAAGTGGCGATCTCTACTTGCTGAATATGATGATGTTAAAAAAGGAAGAAGATCTTCCAATTTGGACCCTGAATTGTTTGATGCTATTGGAAGAGTTGTTAAAGGAAGGGAAGAAAGAGGTGAAATTGATCGTGAAAGTGATGCTGAAATTGGGAATGAAGATCTTGATGCTACCGTTGAAATTGAAACTGGATCCAGCTTTTTCAAAAAGAAAGTGTTAGGATCCAAAAGGAAAAGGCAGCAAAGTAAACCTAAGAGATACCGTGAAGAAAAGCCTAAGGAAAGCCATAAAGAACAGCCCGAGAATACTCATTTAGAAGACGAGTATTTAAAAGACTTCCTTGGAAAGAAATCTAAGTTGAAATCTCCTGCAAAAAGGCGTACAAAGCAAATAGAGACACAGCCAACAAGCCTAGCCGAAGTAGACGAAAACCATGACATTGAAGAAAAGCCAAAGCCAACCAGTGTAGGAAACATAAATAATAATAGCAGGGAGGAAAATGAGGAAATGTTGACTCTGAAGTTGCAAGAGTTTGCAATAGAGATTCAAGATATTAATGCTGAATCTGCTGACTGTAAGGAAGCTAACTCGGAGAATATAGAGGATTACCGCACTGAATTTACCAGACGCCAAGGCGATAAGCTCATAGCAAGACTAGGAAATTTCTCTAACACCCTTAAACAACTATGTGATCTTCTCCAAGAGTGTAAATGA 975 0.4174 MFAFSASSFLPMNRKMTENPRDGAGNRRTRSQAAPEWTVTESLILVNEIAAVEADCSVEFSSYQQWDIISENCAALDVDRNLAQCRRKWRSLLAEYDDVKKGRRSSNLDPELFDAIGRVVKGREERGEIDRESDAEIGNEDLDATVEIETGSSFFKKKVLGSKRKRQQSKPKRYREEKPKESHKEQPENTHLEDEYLKDFLGKKSKLKSPAKRRTKQIETQPTSLAEVDENHDIEEKPKPTSVGNINNNSREENEEMLTLKLQEFAIEIQDINAESADCKEANSENIEDYRTEFTRRQGDKLIARLGNFSNTLKQLCDLLQECK 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00839 324 Gene3D - 37 97 - -
Trre1g00839 324 Pfam Myb/SANT-like DNA-binding domain 35 113 IPR044822 -
Trre1g00839 324 MobiDBLite consensus disorder prediction 13 34 - -
Trre1g00839 324 ProSiteProfiles Myb-like domain profile. 37 93 IPR001005 -
Trre1g00839 324 PANTHER OSJNBA0043A12.37 PROTEIN-RELATED 18 320 - -
Trre1g00839 324 MobiDBLite consensus disorder prediction 172 206 - -
Trre1g00839 324 MobiDBLite consensus disorder prediction 159 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00839 Trre-Chr1 6350481 6352960 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00839 - - mtr:11421388 454.136