Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00823 ATGGATGTAATGGTGGGACCCACTTTCTCCATCGACGTTCCGACGTCACCGCCGTTTGCCGGAAACCGTCCGACCGGTAACGTGTTTTTCGCCGGTGACTCATCGGAGAGCTCGTCTTCGATCGGTACACCGGATGATAGTGACATAGAAAACGATAATGTTTCTCCTAAGAGACATCGTGAAGATGATGATGATGAAGATGAAGATGAAGAAGTTCAGAGCAAGTTTAAGGGTTTGAATTCTCTTGATTCTTTAGATGATTCTCTTCCTATCAAGAAGGGATTATCGAATCATTTTATTGGAAAATCAAAGTCATTTTCGGATCTATCACAAGTGACAAATGTGACAGAATTGAAGAAACAAGAGAATCCATTCAACAAGAGGAGAAGACTTTTGATTGCATCTAAGTTATCAAGAAAATCATTTTATTCTTGTTTTAATCCAAAATCAATGCCCCTTTTGCGTGTGAATGAGGATGAAGATGAGGATGATGATGATGATGAGAATCAAAGAGTAGATAAAGAAGTCACTACAAAAGGGTCATCACCATCATCTTCATCTTCTTCAATGGAGGAAAAGAAGAATCCACAAGAAGAAGTGATGATGAGACAATTAAACAATAGAATGCCTCAATCTTATGCTCATCATATGAGGCTTAGATTAGGGAGCTTTAAGTCTAGGAGCTTTTCTCTTGCAGATCTACAAGAACATGATGAGGTGGAGGAAGATGATGATGATGATGAGGAACAACATTTGGATTAA 762 0.3898 MDVMVGPTFSIDVPTSPPFAGNRPTGNVFFAGDSSESSSSIGTPDDSDIENDNVSPKRHREDDDDEDEDEEVQSKFKGLNSLDSLDDSLPIKKGLSNHFIGKSKSFSDLSQVTNVTELKKQENPFNKRRRLLIASKLSRKSFYSCFNPKSMPLLRVNEDEDEDDDDDENQRVDKEVTTKGSSPSSSSSSMEEKKNPQEEVMMRQLNNRMPQSYAHHMRLRLGSFKSRSFSLADLQEHDEVEEDDDDDEEQHLD 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00823 253 MobiDBLite consensus disorder prediction 232 253 - -
Trre1g00823 253 MobiDBLite consensus disorder prediction 176 191 - -
Trre1g00823 253 MobiDBLite consensus disorder prediction 28 49 - -
Trre1g00823 253 MobiDBLite consensus disorder prediction 1 87 - -
Trre1g00823 253 PANTHER OS08G0516900 PROTEIN 34 238 - -
Trre1g00823 253 MobiDBLite consensus disorder prediction 151 214 - -
Trre1g00823 253 MobiDBLite consensus disorder prediction 236 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00823 Trre-Chr1 6232272 6233383 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00823 - - adu:107495381 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00823 1 6232272 6233383 Trre1g00823 1 6232272 6233383 ECH
Trre1g00823 1 6232272 6233383 Trre5g05351 5 54295938 54296821 PCT