Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00820 ATGGATGTTACAATTTCATTTGCTTTGTTTTCCACAAATTCACTCTTCCATGAACTTTCTTTAATCAAGTGTGCAGATAGTAGCACAGTTGTTGGGAATGAGAAGAAGAAGACCCCATCTTCTAATTCTCCCCTCACAACAGCCAAAAGAACCACAAAACCATCCACAACAACTACTACTACCTCTACAACCAACAAGAGTAACTCAACCACTCCATCAGAGAAAAACAACCCAAACTATCTAAAGCCCACAACAAGTTTCAGAAAGCCCAAAACAGAAACTCCAATTAAGCCTTCTCCAATTAGAAGAAGATCATTGGATAAACCACTCTCATCTTCAAACTTAACAGCAAAAACAACACAACCAACACCTTCAAGATTACATAAAGCCCTTGTTTCCCCTGGCCCTAGAGAAAGATCTCATTCACTAAATATTAGATCTTCCAATCCTCAAGTTAAAGGCACCAACCCTTCAAAACCCATTTCAGATAAGGCACCAAGTGATGCAAAAACTAAGCTAGTATGGAAAAGGGCCACAAAGAAGATCAACACCCCTAATAACAACATTGCTACTTCTAACACCACAAAGAAGGTGGCTAATGATCATGCTTCTTCTGCTAACCCTACCAAGACCAAAGCTGTGATTACAGATTCTGATTCATCAAATGTTGAAACTGAGGATGTTAAAGAAGTTACAGACCAAGAAGCTGAAGTGATAAAAGTGGAGAATAAAGATCATGCATCTAATGTGATTTCAACTGATGTACACTCGGAATTTGTACACGAGGATGAAAATGATCAGGTTCTTAAGGATTCTGACCAACCCCAGAATCAAGATGATGATGAGAAAGTAATTTCTACAGTTTCAGAAGAAGAAATAGCAGAAAAGGAGACACAAGGTGAGAAACCTGAAGTTGAGCATGAAGAGAAACAGACCAATAGTGAGAATCACCCAGGAGAAGTTGATCACTCTGAGGTTGCTGCGAATGAAAAGGAAGAACATGAAAGTGGGATTGTAATAGAAGATCAAAAAAGTGAGAATCACCAAAAAGAAGTTGACCATTCTGAGGTTGAAAGGGAAGCTGCTGTGAATGAAAAGGAAGAAAATGAAAGTGGGATTGTAATAGAAGATCAAAAAGGTGAGAACAACAATGAAGAACAAAATGAGAACAAAAATGAAGAGAAACCTGAAGTTGAGCATGAAGAGAAACAGAACAATAGTGAGAATCACCAAGAAGTTGATCATTCTGAGGTTGAAAGAGAAGCTGCTGCAAATGAGAAGGACGAAAATGAAAGTGGGATTGTAATAGAAGATAACAAAAGTGAGGACAACAATGAAGAAGAACGGGGAGGGGAAGAGAAGGAAGCTGTTGAAGAAGCTAAGGCTGAGGTAGCACAACCAAAGCAACAATTAGCAGCAAAAGGGAAGAATGAATCTCAAGTGTCTAATGATATGATTGAGGAGACTGCAAGCAAGCTATTGGGGAGAAAGAACAAGGTTCTTGCATTGGCTGGAGCATTTCAAACTGTCATTGATCATCAAGCCAAATGA 1551 0.3888 MDVTISFALFSTNSLFHELSLIKCADSSTVVGNEKKKTPSSNSPLTTAKRTTKPSTTTTTTSTTNKSNSTTPSEKNNPNYLKPTTSFRKPKTETPIKPSPIRRRSLDKPLSSSNLTAKTTQPTPSRLHKALVSPGPRERSHSLNIRSSNPQVKGTNPSKPISDKAPSDAKTKLVWKRATKKINTPNNNIATSNTTKKVANDHASSANPTKTKAVITDSDSSNVETEDVKEVTDQEAEVIKVENKDHASNVISTDVHSEFVHEDENDQVLKDSDQPQNQDDDEKVISTVSEEEIAEKETQGEKPEVEHEEKQTNSENHPGEVDHSEVAANEKEEHESGIVIEDQKSENHQKEVDHSEVEREAAVNEKEENESGIVIEDQKGENNNEEQNENKNEEKPEVEHEEKQNNSENHQEVDHSEVEREAAANEKDENESGIVIEDNKSEDNNEEERGGEEKEAVEEAKAEVAQPKQQLAAKGKNESQVSNDMIEETASKLLGRKNKVLALAGAFQTVIDHQAK 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00820 516 PANTHER EMB|CAB62594.1 44 515 - -
Trre1g00820 516 MobiDBLite consensus disorder prediction 30 169 - -
Trre1g00820 516 MobiDBLite consensus disorder prediction 197 221 - -
Trre1g00820 516 Coils Coil 375 395 - -
Trre1g00820 516 MobiDBLite consensus disorder prediction 197 231 - -
Trre1g00820 516 MobiDBLite consensus disorder prediction 140 162 - -
Trre1g00820 516 MobiDBLite consensus disorder prediction 106 127 - -
Trre1g00820 516 Pfam Plant calmodulin-binding domain 402 511 IPR012417 GO:0005516
Trre1g00820 516 MobiDBLite consensus disorder prediction 31 92 - -
Trre1g00820 516 Coils Coil 340 365 - -
Trre1g00820 516 MobiDBLite consensus disorder prediction 268 462 - -
Trre1g00820 516 MobiDBLite consensus disorder prediction 268 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00820 Trre-Chr1 6217628 6221045 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00820 - - tpra:123907423 661.373