Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00815 ATGCAACCCCAACAGAGTTCGAGAATTGATTTGGGTGAGTTGAAAATACAGATAGTAAAGAAGATTGGACCGGATAAGTCGAAGCGGTACTTTTATTACCTTAACAGGTTTTTGAGTCAGAAGTTGAGCAAGAATGAGTTTGATAAGTTATGTTTTCGGGTAGTCGGGAGGGAGAATCTTCCGTTGCACAATCATTTTATAAAGTCGATTTTGAAGAATGCCTGCCAAGCCAAGACCCCGCCATCAGTTCATCAGTCCGGTTCTTCAAAATCAGGAGCGCCTATTACTAATTTGTCTCCTGGTAGAGAAGATGGACATGAACACAGTGCTGCTAGCTTTCAAAATCATAATGCTTCTATTTGGTCGAATGGGGTTTTGCCGGTGTCACCACGTAAGTTACGGTCGGTAGTGCGTGAACGGAAGCTTAAAGACAGACCGAGTCCACTTGGACCAAATGGGAAAGTTGATCCTGTTGGTCATCAATACACAGCGACAGAAGACAGTGGTAGTAAGGTTGACTTGCAGAATGGAACTCTTACTCCATGTGATTATCAGCGACCAACACAGCATCTTCAAGCAGTTTCTGAGCTACCCGAGAATGTTATGCAGGGGATGGCAGAAAAACAAAGAATACGTGGAAAAGGGCCCACTGAAATATCAACCATGGAAGATGGTGAGGAGTTGGAGCAATTAAACCGCTTCAATTTTGCCAAAAATCCGCTCATAGCACCACTTGGGATTCCTTATTGCTCTGCAAGTGTGGGTGGGCCCCGCAAATCATTGCCTGTGAATAGCACTGGTGATTATGTTAGTTGTAGTGACAGTGGTAGATTATCTGATACAGATACGTTGACAAGGCGCATGGAGCAGATTGCAATGGTACAGGGTCTTGGAGGTGTTTCTACGGAATGTGCAAGTATGTTGAATAGCGTGTTAGATGTGTACTTGAAACGGTTGATCAAGTCTTGTGTTGATCTAGTAGGGTCTCGTTCAGCAAATGAGCCGACGAAGCTGCCAAACTCAAAGAAGCAGATTCAAGGGAAGCTCATAAATGGCATGTTGCAACATAATCAGTTACATGTGCAAAGTGCTGGCAGATTGACAGAATCTGAGCCCGAACACAGATCCCAATTCTCGGTATCTTTGCATGATTTTAAAGTTGCGATGGAGCTAAATCCACAACAACTTGGAGAAGATTGGCCGCTACAATTGGAGAAAATCTCTATGCAATCTTTTCAAGAATAA 1245 0.4353 MQPQQSSRIDLGELKIQIVKKIGPDKSKRYFYYLNRFLSQKLSKNEFDKLCFRVVGRENLPLHNHFIKSILKNACQAKTPPSVHQSGSSKSGAPITNLSPGREDGHEHSAASFQNHNASIWSNGVLPVSPRKLRSVVRERKLKDRPSPLGPNGKVDPVGHQYTATEDSGSKVDLQNGTLTPCDYQRPTQHLQAVSELPENVMQGMAEKQRIRGKGPTEISTMEDGEELEQLNRFNFAKNPLIAPLGIPYCSASVGGPRKSLPVNSTGDYVSCSDSGRLSDTDTLTRRMEQIAMVQGLGGVSTECASMLNSVLDVYLKRLIKSCVDLVGSRSANEPTKLPNSKKQIQGKLINGMLQHNQLHVQSAGRLTESEPEHRSQFSVSLHDFKVAMELNPQQLGEDWPLQLEKISMQSFQE 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00815 414 MobiDBLite consensus disorder prediction 78 110 - -
Trre1g00815 414 MobiDBLite consensus disorder prediction 78 96 - -
Trre1g00815 414 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 4 327 IPR024738 GO:0070461
Trre1g00815 414 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 412 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00815 Trre-Chr1 6172031 6173275 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00815 - - gmx:100803746 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00815 1 6172031 6173275 Trre1g00815 1 6172031 6173275 ECH