Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00787 ATGAAGAAAGACAATGCATGGCCGCAGTTCATAAGAAATCATCTGATCATGGTTGGATCAAGACACCGATCAAACTTAAAGAGGCCTACATGGATTATTGTTTTAGTGTTCTTAGTGTGTTTTTTTCTGATTGCTGCTTATATTTATCAGCCACGGAGCCCCTCAACGTGTTCTTTCTTTAACTCTGAAGGTTGTAGTGTTGTTGGTGGTGGTAGTAAGTTTATTCAGCCACCACCCGTGCAGGCACGGGAATTAACCGATGCAGAGATTCAATCTCGGGTTGTTATTAATGAAATTCTTAAGTACTATACTGTTCAAACCAAGGTCCCTAAAGTTGCTTTTATGTTTTTGACCCCGGGTTCGTTACCTTTCGAGAAGCTCTGGCACACATTCTTCCGGGGCCATGAAGGAAAATTCTCTGTCTATGTACATGCATCGAAGGAAAAACCGGTACATGTCAGCCCCTATTTTATTGGCCGAGACGTTCACAGTGAACCGGTATCTTGGGGAAAAATTTCTATGGTTGAAGCAGAAAGGAGACTTTTGGCGAATGCACTTTTAGACCCTGATAACCAACATTTCGTCTTGTTGTCCGATAGTTGTATACCGGTGCGGCGCTTTGATTTTGTATACAACTACTTGTTATTAACAAGTGTCAGCTTTATTGACAGCTATGTGGATACTGGTCCTCATGGAAATGGCAGGTATATCGAACATATGTTGCCTGAAGTAGAAAAGAAGGATTTTCGAAAGGGTTCACAGTGGTTCTCGATGAAACGACAGCATGCTATAATAACTATGGCAGACAGCCTTTATTTTAATAAATTCAAGCATCATTGCAGGCCGAATATGGAGGGAAATCGCAACTGCTATTCCGATGAGCATTACTTGCCAACATTTTTGAATATGCTTGATCCAGGCGGAATTGCAAATTGGTCGGTAACGTATGTTGATTGGTCTGAAGGAAAATGGCATCCTAGGTCATTCAGGGCTCATGATATTACTCATCAACTCATGAAAAAAATAGCATACATTGATGAAAGTCCACATTATACAAGTGATTCAAAGAGAACAGTCGTGATCACGCCTTGCGAATTAAACGGCTCAAAACGATCATGTTATCTATTCGCCCGGAAGTTTTATCCGGAAACTCAAGATAAATTGATTCAACTTTTCTCAAACTCCACAACATTCTAA 1197 0.406 MKKDNAWPQFIRNHLIMVGSRHRSNLKRPTWIIVLVFLVCFFLIAAYIYQPRSPSTCSFFNSEGCSVVGGGSKFIQPPPVQARELTDAEIQSRVVINEILKYYTVQTKVPKVAFMFLTPGSLPFEKLWHTFFRGHEGKFSVYVHASKEKPVHVSPYFIGRDVHSEPVSWGKISMVEAERRLLANALLDPDNQHFVLLSDSCIPVRRFDFVYNYLLLTSVSFIDSYVDTGPHGNGRYIEHMLPEVEKKDFRKGSQWFSMKRQHAIITMADSLYFNKFKHHCRPNMEGNRNCYSDEHYLPTFLNMLDPGGIANWSVTYVDWSEGKWHPRSFRAHDITHQLMKKIAYIDESPHYTSDSKRTVVITPCELNGSKRSCYLFARKFYPETQDKLIQLFSNSTTF 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00787 398 Pfam Core-2/I-Branching enzyme 112 342 IPR003406 GO:0016020|GO:0016757
Trre1g00787 398 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 34 390 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00787 Trre-Chr1 5937818 5941711 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00787 - - gmx:100788165 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00787 1 5937818 5941711 Trre1g00787 1 5937818 5941711 ECH