Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00765 ATGGAAAAATCTTCACAAACCGAAGAACAATCACAATCACACGATTCTTCAACTTCATCGCATGATCACCAAAACTGGAAAACCGAGCAAAATATTCTCAAGGAAAAATTGATCAAAGAGGATGATTTCGCGTGGAAATTACCACCAAGTACATCACAAATTGGTTCACAAGAATTGAGATACGTTGGTGGATGTGATATAAGCTTCTCAAAACATGATCCATCATTGGCGTGTGGTACACTTGTAGTATTGGATTTTCACACTCTTGAAGTAGTTTATCAGGATTTCTCTTTGGTTACATTGAGTGTCCCTTATGTGGCTGGATTCCTTGCCTTTCGAGAGGCTCCAGTTATTCTAGATATTCGGGAGAAAATGAAAAGGAGTGATAATCCTTTCTACCCCCAGTTGTTGATGGTTGATGGAAATGGAATACTTCATCCCAGAGGTTTTGGCCTGGCCTGTCATATTGGAGTTACGGCCGATCTTCCAACGATCGGAGTTGGAAAGAACTTGCATTGTGTGGATGGTCTCAATCAATCTAGAGTGAGAAATCTTCTTGAAGCCAAAGAAAACACTTCCAAAGATTTTGTTACTTTGGTGGGTTGCTCTGGGCGCACATGGGGAGTGGCCATGAGATCTACACAGGGATCTGTAAAGCCAATATTCATATCAATTGGTCACAGGATATCACTCCAGACTGCCACTGCGATTGTTCAAATGACTTGCAAGTATCGTGTCCCTGAGCCAATTAGGCAGGCTGATATAAGATCCAGAGACTACATTCGAAAGTTTGAAATGAATCCCAAACTGAGGTAA 816 0.4142 MEKSSQTEEQSQSHDSSTSSHDHQNWKTEQNILKEKLIKEDDFAWKLPPSTSQIGSQELRYVGGCDISFSKHDPSLACGTLVVLDFHTLEVVYQDFSLVTLSVPYVAGFLAFREAPVILDIREKMKRSDNPFYPQLLMVDGNGILHPRGFGLACHIGVTADLPTIGVGKNLHCVDGLNQSRVRNLLEAKENTSKDFVTLVGCSGRTWGVAMRSTQGSVKPIFISIGHRISLQTATAIVQMTCKYRVPEPIRQADIRSRDYIRKFEMNPKLR 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00765 271 Pfam Endonuclease V 56 254 IPR007581 GO:0004519|GO:0006281
Trre1g00765 271 Gene3D archaeoglobus fulgidus dsm 4304 superfamily 11 264 - -
Trre1g00765 271 PANTHER ENDONUCLEASE V 14 267 IPR007581 GO:0004519|GO:0006281
Trre1g00765 271 CDD Endonuclease_V 26 259 IPR007581 GO:0004519|GO:0006281
Trre1g00765 271 Hamap Endonuclease V [nfi]. 22 264 IPR007581 GO:0004519|GO:0006281
Trre1g00765 271 MobiDBLite consensus disorder prediction 1 25 - -
Trre1g00765 271 MobiDBLite consensus disorder prediction 10 25 - -
Trre1g00765 271 FunFam Predicted protein 21 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00765 Trre-Chr1 5785359 5790667 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00765 K21813 - gmx:100527675 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00765 1 5785359 5790667 Trre1g00765 1 5785359 5790667 ECH