Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00748 ATGGAAGGTAGTGAAGATAACTCTATTGGTACTGAAGTTCCTAAGAAATCAAGATCTTTGGATCTTAAAAGTTTATATAATTCGAAATTGACAGAAGAGGCTCCTAAGAAACACTCAAAGAGAAAGGGTAGTGGTAGTACTGGGGGTGGTGATGAGAGGAGGAATAAAAGAAAGAAGGCTAGAAAGGAAGTGTCCTTAAGTAGTTTAGAAAATGCTGATGGTAGTGGGAAGAAGGTTGTTGATGAAGTAGTTGAGAAAGGGCCAAGTTCTGGTGGGGACAATTTGGGTGAACTGAAATTGGGAGTGAGTGAAGGAATAAATAGCAGTAGTGGGCTCAATGGAGTTTTGTTAGGTGTTGGTAGTGATGTTTGTATTCCTAAGCGTAAGAGGACTTTAGTGGGCCGGAAGAAATCTGATCATGGTCAATCATCGAATCTTGTAGAGGATCCTGCTCAGGAATTTGGCCATGATGATCTGGTGCCTAAGTTAGGTAGTGACGATGATTCAGGTAGGGCAGTTCAATCTTCAAAGATAAATTTGAAGAAACATTTTGATGAGTTTAAGGAAAGTAGGAATAGTGATTCAAATTCAAATTCAAATTCAGTTCAGCGTGTCAAGGAGAATGGGGATCATGTCCCTAACTCTGTTGTAAATAGTGGGCATTCCTCTTTAAAAAAGTCAAAAAAGAAGGATAGGAAGCAAAAGGCTCTAGCTTCAGATAAACCGAGGGTTTCCAAGGAGGCTGAACCTTTGATCGATAGCTGTACAATATCTGTTGATTTGCATGAAGATGATGAAGAAAATCTTGAGGAGAATGCAGCAAGGATGCTTTCTTCAAGGTTTGATCCAAGCTGTACTGGGTTTTCTTCTAGTAGCAAGTCTTCTCCCCTGCGATCAGCAAATGCTCTGTCCTTTTTGATATCTTCTAGTCGAAATATTGTTAATCATGCCTCAAAGTCTCGGTCAGGTTCAGAATCAGCTTCAGTTGACACTGCTGGCAGACATTTGAGGCCAAGGACACAATGCAAAGATAAGGAAAAGAAGTCCAGGAAGAGGCGCCACTTTTATGAAATTCTGCCTGGTAATGTAGATGCATACTGGGCACTTAAACGTAGAATTAAAGTATTTTGGCCTTTGGATCAGAGTTGGTATTATGGCTATGTTGATGCTTATGACGAAGGGGAAAGGCTTCACCATATCAAATATGACGACCGAGATGAAGAATGGATTAATCTCCAAACTGAGAGGTTCAAACTCTTGTTACTTCGTAATGAAGTTCCTGGACGTACAAAGGGGGGAAGGGATTTGGCAAAAAGTAGAAGGTCTGATCAACAAAATGGAAGCAATTCCAGAGAAGAAAGACAGGGAGAAGTGATTAAGGAGGATGATAGCTGTGGTGGGAGCTCTATGGACTCGGAGCCTATAATTTCGTGGTTGAATCGATCTTCTCATCGGCTCAAGCCATCTTTTCACCGCATTAAGAAACAGAAAACTTCCGTCACACATCCAAGTACAACCTCATCATTGTTATGTGATGAACCTGTTTCAGTAAAAGGAAATGCAACTAAGAAATCCTCTAGAGGTGTTACAAATAATTTGTCTTGTGGTTCTTTATCACAAGATAAGTTAGGTGATAATTTGAGGGAGAATTCCTCATTGCAAAGCGCCACTCAAATTAAAGATCGCAAACTGCCTGCTGTATATGTTAGGAAGCGGTTTCGAAGGTCAGCTCCAATGTCGCCTCCTGTGCCTAAAGAGAATCACATCATTGCAAGTACACCCTGTTCTATTTCTTGTGATCATGTGGTTGGTCGGATCCAGAGTGTAAAAGAACCAAGTGGCAGGATGTTTGAGGGGCCGCTGTGGTTCAATTACAATGAGGGAGTATCACAAATGTTTTGGGACATGGGGTCAGCATCATTCAAATTTGACTTACACTTTCCTATAAGGCTCATATTGAATGAAGCTTTTCAATCTGAAAATTTGTGGCTGCTCTATGCTGTTTTGCTGCTTCGGTATGGTACAGTTGTGACCAAGTGGCCAAGAGTTTGTTTGGAGATGCTTTTTGTTGATAATGTGGTTGGGTTGAGATTTCTATTATTTGAAGGCTGCTTGAAGATGGCTGCAACCCTTGTCTTTTTTGTCCTCACTGTTTTCCATCAACCTGCTCCCTTGGGGAGTAGTGACTTGCACTTGCAGCTCCCGTTTACATCTATTGGATTCAAACTTTCCAGTCTTCATGCGATCAAGCAGCCACTTGTGTTTCAACTATATAATTTCTCCAGATTGAAGAATTCAAATTGGGCGTGCTTGGATTCTAAGCTTAAGAGGCACTGCCTACTCAGTAAGCAGCTCCATCTATCTGAATGCACATACGATAACATCCAGGCACTTCAGCATGGATCAAGCGAGTTCACCGCAGCTTCCATCCGTGAGCCCTCATCAGTCAAGGTAGTGAGGAGGAGGAGGAGGCCAGGGATTAACATCATGGGTGTTTCCAAAGTCTCCACTCGAGTTGATACTCATCAATCTTCTGATGTCGGCGAGAGGAAGCTTCCTCCATTTGCTCTTTCTTTTGCTGCTGCACCTTCATTTTTTCTATGTTTGCATCTTAAGTTGCTGATGGAGCAGTCAGCAGCTCATATAGGCTTTTATAATCATGTACCAACAGATGGTCAGGAAGATTCTGGCTTGGTGACAGGTGACTATTCCAACATTGATGATTGCTCTAACAGGAATTCCGAAATTATTTTACGGCAAGATACGGCGACTTTGTCAAATGATGCTGCAGGTGATGGATTGTTGTGTGCTGGGTTAGATCAATTAGCCGGTCCATCTACCTGTGGTGATCGAGTTGTCTCTCAGAATGACCCGAATATTGGTCTTCATGGCACTGAAACTTCTATTTCCCATGGTTCTGAGAGGCTTGGTAATATCCACTCACCGGCATCGCAATCCCGTCATTCAGCAAAAAAGCTAGGATCATTACCTTCAAGCTCTTCAATATACCAGGATAAGGCAGGCGATGATTCTCGTTCTTTTAATGGTGATCTCCATGTCCAAATTCCTTCAGTTGATGAATTTGAGAAACCTAACGCACAGTCTCCTGATTTGTCTTGGAACATGAATGGGAGTGGTATTCCAAGCTCCAATAGAACTGCTCCAAGAAGTTCTTATCGGAACCGGAATAGTTCGTTGTCAGTGGGATTCCAGTCACATGCATGGGCTGACGGCAAGACCGACTCTCTTTACAACGATTTTAGCAATGGACCCAAAAAGCCGCGTACCCAAGTATCATATTCAGTACCGTTTGCAGGGTATGAATTAAATTCAAAGCACAGAAGCAATAATCAGAAAGGGCTTCCTAACAAACGAATTAGAAAGGCCAGTGAAAAGAAGTCCTCAGATGTTGCTAGGGCCCCTGAAAAGAATTTTGAATGCTTATCTTGTGATGCAAATGTCTTGATTACAGTTGGTGATAAAGGGTGGAGAGAATATGGCTCCCGTGTTGTATTGGAGCTGTTTGAACACAATGAGTGGAGACTCTCTGTAAAACTTTTAGGAGTTACAAGGTATTCATACAAAGCACATCAGTTTATGCAGCCTGGATCAACAAATCGTTATACACATGCAATGATGTGGAAAGGAGGGAAGGACTGGACATTGGAATTTTCTGACAGGAGTCAGTGGGCTCTATTCAAGGAGATGCACGAGGAATGCTACAACCGGAACCTCCGTGCTGCTTCAGTTAAAAACATACCTATTCCTGGTGTTCACTTGATAGAAGAAAATGATGATAATGGATCCGAGGTAACTTTTGTTCGGAGCTCTATGTATTTCCGACAGCTTGAAACAGATTTTGAGATGGCTCTGAATCCATCCCGGGTTCTGTATGACATGGATAGTGAGGATGAGCAATGGTTTTCAAACATTCAAAATTCTGAAATGTACAATGGTGACTTGAATGGCTTCACGGAGGAGATGTTTGAGAAGACAATGGACTTGTTTGAAAAGGCTGCATTTGCTAAGCCGCGTGATCAGTTTACACCAAATGAAATAGAGGAACTCATGCTTAATGTTGGGCCTTTGTGTATAGTCAAAATCATTTATGACCATTGGCACCAGAGAAGGCAGAAGAAGGGAATGGCTTTAATACGGCACTTTCAGCCACCTATGTGGGAACGATATCAACAGCAACTGAAGGAGTGGGAAGTAGCCGTGACCAAGAATAACCTTTCTTCTAACGGGGATAAGGGTGCAACTTTGGAGAAGCCACCTATGTTTGCTTTCTGTTTAAAACCAAGGGGTTTGGAATTACAGAACAAGGGATTAAAACATCGATCTCAAAAGAAAATATCAGTCTCTGGGCATACAAACAGTTTTCGATATCACGATGGCTTCCAGACTACTGGAAGAAGACCAAATGGCTTAGCATTTTCTGATGAAAGGTTTGTATACCCAGGCCATAGTTATGATTCTTTGGACGAATCTCCATTGCCTCTGACATCACCAAGAGTATTCTCCCCTCAGGATGCTGCCAGCATGAAATATTATTCTATGAGCAATGATACATACTACAAAAATCATATGCAGAAACCTCACAAAAGCAAGTCCAAGAAACTTGGGTCATTTATATATAATAATGATTCACGGATGCCAACTTCTTACGGTCAGACAATGCCAGCATCAGAAAAGAGAAATGGGGTTCGATCGAACTTGGTCGGTTATGACATGCCCGGTCACAGGCAGTACGTAGCAGATGGTGCTCACAGGCATAGGATTGAACAATTGAATGGTCCAGCCCAAGCAGAATATAGACGACGCGAAGTAGAAAATGCTGCTCTGCATGCACGCAAGACAGCTAAGTTTAAGAGACACAAGGCTGAAAAATTGCTTTCTAGAGCAGATGTAGCAACTCACAGGGCTATGGTTGCTCTTATGACTGCTGAAGCAAAGAAAGCTTCCGACGAAGCAGTTGGTGATGGTAGGAACACCAACAGCTGA 5004 0.4229 MEGSEDNSIGTEVPKKSRSLDLKSLYNSKLTEEAPKKHSKRKGSGSTGGGDERRNKRKKARKEVSLSSLENADGSGKKVVDEVVEKGPSSGGDNLGELKLGVSEGINSSSGLNGVLLGVGSDVCIPKRKRTLVGRKKSDHGQSSNLVEDPAQEFGHDDLVPKLGSDDDSGRAVQSSKINLKKHFDEFKESRNSDSNSNSNSVQRVKENGDHVPNSVVNSGHSSLKKSKKKDRKQKALASDKPRVSKEAEPLIDSCTISVDLHEDDEENLEENAARMLSSRFDPSCTGFSSSSKSSPLRSANALSFLISSSRNIVNHASKSRSGSESASVDTAGRHLRPRTQCKDKEKKSRKRRHFYEILPGNVDAYWALKRRIKVFWPLDQSWYYGYVDAYDEGERLHHIKYDDRDEEWINLQTERFKLLLLRNEVPGRTKGGRDLAKSRRSDQQNGSNSREERQGEVIKEDDSCGGSSMDSEPIISWLNRSSHRLKPSFHRIKKQKTSVTHPSTTSSLLCDEPVSVKGNATKKSSRGVTNNLSCGSLSQDKLGDNLRENSSLQSATQIKDRKLPAVYVRKRFRRSAPMSPPVPKENHIIASTPCSISCDHVVGRIQSVKEPSGRMFEGPLWFNYNEGVSQMFWDMGSASFKFDLHFPIRLILNEAFQSENLWLLYAVLLLRYGTVVTKWPRVCLEMLFVDNVVGLRFLLFEGCLKMAATLVFFVLTVFHQPAPLGSSDLHLQLPFTSIGFKLSSLHAIKQPLVFQLYNFSRLKNSNWACLDSKLKRHCLLSKQLHLSECTYDNIQALQHGSSEFTAASIREPSSVKVVRRRRRPGINIMGVSKVSTRVDTHQSSDVGERKLPPFALSFAAAPSFFLCLHLKLLMEQSAAHIGFYNHVPTDGQEDSGLVTGDYSNIDDCSNRNSEIILRQDTATLSNDAAGDGLLCAGLDQLAGPSTCGDRVVSQNDPNIGLHGTETSISHGSERLGNIHSPASQSRHSAKKLGSLPSSSSIYQDKAGDDSRSFNGDLHVQIPSVDEFEKPNAQSPDLSWNMNGSGIPSSNRTAPRSSYRNRNSSLSVGFQSHAWADGKTDSLYNDFSNGPKKPRTQVSYSVPFAGYELNSKHRSNNQKGLPNKRIRKASEKKSSDVARAPEKNFECLSCDANVLITVGDKGWREYGSRVVLELFEHNEWRLSVKLLGVTRYSYKAHQFMQPGSTNRYTHAMMWKGGKDWTLEFSDRSQWALFKEMHEECYNRNLRAASVKNIPIPGVHLIEENDDNGSEVTFVRSSMYFRQLETDFEMALNPSRVLYDMDSEDEQWFSNIQNSEMYNGDLNGFTEEMFEKTMDLFEKAAFAKPRDQFTPNEIEELMLNVGPLCIVKIIYDHWHQRRQKKGMALIRHFQPPMWERYQQQLKEWEVAVTKNNLSSNGDKGATLEKPPMFAFCLKPRGLELQNKGLKHRSQKKISVSGHTNSFRYHDGFQTTGRRPNGLAFSDERFVYPGHSYDSLDESPLPLTSPRVFSPQDAASMKYYSMSNDTYYKNHMQKPHKSKSKKLGSFIYNNDSRMPTSYGQTMPASEKRNGVRSNLVGYDMPGHRQYVADGAHRHRIEQLNGPAQAEYRRREVENAALHARKTAKFKRHKAEKLLSRADVATHRAMVALMTAEAKKASDEAVGDGRNTNS 1667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00748 1667 MobiDBLite consensus disorder prediction 954 1017 - -
Trre1g00748 1667 MobiDBLite consensus disorder prediction 492 511 - -
Trre1g00748 1667 MobiDBLite consensus disorder prediction 430 470 - -
Trre1g00748 1667 MobiDBLite consensus disorder prediction 178 192 - -
Trre1g00748 1667 Pfam Enhancer of polycomb-like 1245 1338 IPR019542 -
Trre1g00748 1667 MobiDBLite consensus disorder prediction 1034 1064 - -
Trre1g00748 1667 MobiDBLite consensus disorder prediction 430 467 - -
Trre1g00748 1667 MobiDBLite consensus disorder prediction 954 1008 - -
Trre1g00748 1667 MobiDBLite consensus disorder prediction 30 66 - -
Trre1g00748 1667 Gene3D - 367 415 - -
Trre1g00748 1667 PANTHER ENHANCER OF POLYCOMB 996 1661 IPR024943 GO:0006357|GO:0032777|GO:0035267
Trre1g00748 1667 CDD Tudor_Agenet_AtEML-like 371 419 - -
Trre1g00748 1667 MobiDBLite consensus disorder prediction 127 251 - -
Trre1g00748 1667 MobiDBLite consensus disorder prediction 193 222 - -
Trre1g00748 1667 MobiDBLite consensus disorder prediction 151 165 - -
Trre1g00748 1667 MobiDBLite consensus disorder prediction 1109 1137 - -
Trre1g00748 1667 MobiDBLite consensus disorder prediction 233 248 - -
Trre1g00748 1667 MobiDBLite consensus disorder prediction 1 99 - -
Trre1g00748 1667 MobiDBLite consensus disorder prediction 1029 1064 - -
Trre1g00748 1667 MobiDBLite consensus disorder prediction 316 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00748 Trre-Chr1 5658029 5664637 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00748 - - gmx:100781778 1928.68