Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00746 ATGAAGCCGCGACAGTCTTCTTTGAATCCATATGCAGCCGCGTATGTTCCTGTCTCGAAAAGGGATACTAGTGTTAGATTTTATCCGGCGGAAGAGGACAATAACAGTTCACAGGAATATGATGGGACTGTATGGTTTCAGCCTCCTCAATATAGGACGAATGATGTCGAGAAAAACGCTCAAAGGCTTGCTCCGGTGAAAAACCAGCCAGCTTCTAGTTCTTACTTTTCATCGCCGCAGAGTGTGGCACAGCTGACAGAGAATCAGTATATGGATGAAGAGCTGGATATAGATTTGGAATATCTTAGGATGACATTTCCTGGTATATCTGATGAGTCCCTTGTAGATGTCTACAACGTAAACAGTGGTGACCTGGATGCTGCTATTGACATGCTCAGTCAACTTGAGTTTGATGATGCTGTTGACGCTTCTGGAAGTCTGCCAGAGACGCTGGATATTGGTGATGTTTCAGAGCCTGTATTGCCAGTTGATTCTGCTTCCTCAAAACAGAAGAATGCAACAGCTGGAGCCAGCACTTCATTTGGTCACTCATGA 555 0.4486 MKPRQSSLNPYAAAYVPVSKRDTSVRFYPAEEDNNSSQEYDGTVWFQPPQYRTNDVEKNAQRLAPVKNQPASSSYFSSPQSVAQLTENQYMDEELDIDLEYLRMTFPGISDESLVDVYNVNSGDLDAAIDMLSQLEFDDAVDASGSLPETLDIGDVSEPVLPVDSASSKQKNATAGASTSFGHS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00746 184 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 6 1 180 IPR038981 -
Trre1g00746 184 MobiDBLite consensus disorder prediction 148 184 - -
Trre1g00746 184 MobiDBLite consensus disorder prediction 163 184 - -
Trre1g00746 184 Gene3D - 80 142 - -
Trre1g00746 184 ProSiteProfiles CUE domain profile. 94 137 IPR003892 GO:0043130
Trre1g00746 184 CDD CUE_CID7_like 96 138 IPR041806 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00746 Trre-Chr1 5637671 5639398 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00746 - - gmx:100781938 199.134