Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00735 ATGTTAATGGGAATGAAGGATTTGTTTGATTTACCTGAAGAAATTAAGAGAAAGCACAAAAGTGATGTTCCTTATAGTAGCTACAATGGTGACTCTACTACCATTCCCTTATGTCAAACCTTTGGAATTCATGATGCTCCCCTTGAAGATAATTCTTTGGCTTTTACTAATCTCATGTGGCCTCAAGGAAATCCAACTTTCTGTGAGACAATGAAGACTATGGGCACCAAGATGGTTGAATTGCATTCTCTCATTCTAAAGATGATTCTAGACGGTTATGGTCTTCCAAAACAATATACTTCAACTATTGAAGAATTGAAGTACCATAGTAGTTTTCGATTCATGAAATACAAAGTTCCTGAAATCAACAAAGATTGTGAAATTGCTTTGGTACCTCACACTGACAAAAATACTTTAACCATTTTATGCCAAAATGAAGTACAAGGTCTTGAGTTTCTTACTAAAGACAATAAATGGATTCAATTGGACATACCTCAAGAAGGATGTATTGTCATTGTTGGTGACACACTCAAGGCATGGAGCAATGGGAGACTTCATGCACCTATACACAGAGTGACTATGTGTGGAGACAAAGAAAGATACTCATTTGGACTATTTACAATGCCAAAGGAAAAGGTGAAAATTGAGGTGCCACATGAATTGGTTGATGAAAAAATGTATCCTCTACGTTATCGTTCATTCAACTATGGGGATTATTTAGACTACTTTGTTTCAACTCTCAAGGAAAATGCACTAGAAGCATTTATAGGCGTTTGA 777 0.3591 MLMGMKDLFDLPEEIKRKHKSDVPYSSYNGDSTTIPLCQTFGIHDAPLEDNSLAFTNLMWPQGNPTFCETMKTMGTKMVELHSLILKMILDGYGLPKQYTSTIEELKYHSSFRFMKYKVPEINKDCEIALVPHTDKNTLTILCQNEVQGLEFLTKDNKWIQLDIPQEGCIVIVGDTLKAWSNGRLHAPIHRVTMCGDKERYSFGLFTMPKEKVKIEVPHELVDEKMYPLRYRSFNYGDYLDYFVSTLKENALEAFIGV 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00735 258 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 240 - -
Trre1g00735 258 SUPERFAMILY Clavaminate synthase-like 4 246 - -
Trre1g00735 258 Gene3D - 1 255 IPR027443 -
Trre1g00735 258 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 107 209 IPR005123 -
Trre1g00735 258 Pfam 2OG-Fe(II) oxygenase superfamily 120 207 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00735 Trre-Chr1 5565136 5568760 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00735 61 239 Glycosyltransferase AT5G59530 26.630 1.80e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00735 - - gmx:100817159 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00735 1 5565136 5568760 Trre1g00735 1 5565136 5568760 ECH