Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00731 ATGGATCCTTTCAAAGAAAAAGCAAAGTGTGTTTGGATTCATGGACCTATCATTGTAGGAGCTGGTCCTTCTGGTATAGCAGTAGCTGCTTGTTTATCAGAACAAGGTGTTCCAAGTCTCATTCTTGAGAGAAGTGATTGCATAGCTTCACTATGGCAAAACAGAACTTATGACCGTTTAAAACTTCATTTACCAAAACATTTTTGTGAACTTCCTTTGATGAATTTTCCTCAAACTTTTCCTCAATATCCAACAAAACATCAGTTCATTTCTTACATGGAATCTTATGCCGATCATTTCGATATTCATCCTAGGTTTAATCAAACTGTTCTTAGTGCTGAGTTTGATTCAAGTTCTGAAATTTGGATTGTTAAAACACATGATGGTTTTCAGTATTTTTCACCTTGGCTTGTTGTTGCTACTGGTGAAAATGCTGAACCTGTTATTCCTATAATTCATGGTATGGAACATTTTCATGGTCCTGTTCTTCATACTAGTGATTATAAATCTGGTTCTGAGTACAAAAACAAAAAGGTTTTAGTCATTGGTTGTGGTAATTCTGGTATGGAAGTTAGCTTGGATCTTTGTAGACACAATGCTATCCCTCATTTGGTTGCTAGAAACACAGTACATATTCTTCCAAGAGATATGTTTGGTTTCTCAACATATGGAATAGCTATGTCATTATACAAATGGCTTCCATTAAAATTAGTAGACAAGTTTCTCTTGTTGGTGGCAAGTTTCCTTTTGGGAAACACAAATCACTATGGTATCAAAAGGCCTAAAACTGGTCCTATAGAGCTTAAACTTGCCACAGGAAAAACTCCTGTTCTTGATGTTGGTCAAATTACACAAATTAAAGCTGGTAACATTAAGGTGATGGAAGGAGTGAAGGAGATAACAAGAAATGGTGCAAAATTTTTGGATGGACAAGAAAAGGAATTTGATGCAATAATATTAGCAACAGGATACAAGAGCAATGTGCCTAGTTGGCTGAAGGGGAATGATTTTTTCACTAAAGATGGAATGCCAAAAACACCCTTTCCTCATGGTTGGAAAGGTGAGCAAGGATTGTATACGGTGGGGTTCACAAAAAGAGGTCTACATGGAACATATTTTGATGCCATCAAAATTTCTGAAGACATTACTAAGCAATGGAAAACACTTAAGAGCAAGAGTTGTAATGATTCACATATCATACTACTTAACAAATAA 1215 0.3572 MDPFKEKAKCVWIHGPIIVGAGPSGIAVAACLSEQGVPSLILERSDCIASLWQNRTYDRLKLHLPKHFCELPLMNFPQTFPQYPTKHQFISYMESYADHFDIHPRFNQTVLSAEFDSSSEIWIVKTHDGFQYFSPWLVVATGENAEPVIPIIHGMEHFHGPVLHTSDYKSGSEYKNKKVLVIGCGNSGMEVSLDLCRHNAIPHLVARNTVHILPRDMFGFSTYGIAMSLYKWLPLKLVDKFLLLVASFLLGNTNHYGIKRPKTGPIELKLATGKTPVLDVGQITQIKAGNIKVMEGVKEITRNGAKFLDGQEKEFDAIILATGYKSNVPSWLKGNDFFTKDGMPKTPFPHGWKGEQGLYTVGFTKRGLHGTYFDAIKISEDITKQWKTLKSKSCNDSHIILLNK 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00731 404 Pfam Flavin-binding monooxygenase-like 18 329 IPR020946 GO:0004499|GO:0050660|GO:0050661
Trre1g00731 404 SUPERFAMILY FAD/NAD(P)-binding domain 17 216 IPR036188 -
Trre1g00731 404 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Trre1g00731 404 Gene3D - 16 389 IPR036188 -
Trre1g00731 404 FunFam Flavin-containing monooxygenase 16 391 - -
Trre1g00731 404 PRINTS FAD-dependent pyridine nucleotide reductase signature 178 196 - -
Trre1g00731 404 PRINTS FAD-dependent pyridine nucleotide reductase signature 16 35 - -
Trre1g00731 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 174 198 - -
Trre1g00731 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 15 37 - -
Trre1g00731 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 135 143 - -
Trre1g00731 404 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 17 389 - -
Trre1g00731 404 SUPERFAMILY FAD/NAD(P)-binding domain 176 387 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00731 Trre-Chr1 5516559 5519207 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00731 K11816 - gmx:100818280 655.981