Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00726 ATGGCAACCACAGTAAGTATTATCTGCAAAAGAACTGTGGTGAGTACAAAGGCCATTGAACCAGGAAAATACTTACCCTTATCAGTTTTGGATCGTTTCATGGAGAAAAACCATATTAGGATGGTGTACTATTACCAAACTTCAGGAGAATTAGAGCTTGGAAAATTGACCAAGAAGTTGAGAGAGAGTTTGTCAGAAATGCTTACTCATTTCCCTATAGTGACTGGAAGGTTGGTAAGAGATGAAATGGGACTTTGGAAAATCAAGTGCAGTGATGCTGGTGTTAGAACTGTGGAAGCAAAAGCCAAAGGAAGTGTGGAAGAGTGGCTAAGAAATGTGGATAGGGAAAAAGAACTTGAACTTGTTTATTGGGAAGATATGCTTGAAAAGCCTTACTATTGGTCCACTTTTTATGTTCAGCTGACTGAATTTGAAGAAGGTGGATTAGCAATTGGCCTAAGCTGCACTCATCTCTTGGCAGATTCCATTTGTGCAACAAGTTTCATGAAGGCTTGGGCTGACATTTCATTAGGCAACAAAATTACTTCACCTCCAATATTTCACCCTTTACCCCCACAAAGATCACAAAACAAAAAGCCCAATAGCAATAGCAACTCCTATATGGGCTTAATATCTCACTATAAATCCTTACTTGAAAAGCCCATTTTTATCAAGGAAGCAAAGTACACTACTATTTCTATGGGCTTCTCACACCACATGGTTCAGGCTTGCATGTCTATGGCCCAATCCATTGGTTCATCAAGCCCAAGCCCAACACCAACACCCTTTGAAGCACTAGCTGGGTTGTTTTGGGTCACTTTAAGCAAAATCAAAGGGTTAAAAAATGGACTTGTTGACATGTCCATATGTTTGGATATGAGAAAAATCTTGGGCTTAGATCAAGGATTCTTTGGAAACTCAATGCTGTATAACAAGGTGCATTTAGAAGAAAAATTAAATTTAAATGAGAATAAATTTCCACAAGCTACTAGGGCCATAAGGGATGTTGTGTCTAAAATTGACAATGAGGAAATAATGGATCTAATTGAGTGGCTTGAAAATAATTATATAAATTCATCTAAAATGATGAATGGTCATGATTTGGTTATTACTAGCTTAGAGGATGTTGACCCTTACTTAGCTATGTTTCAAGATATGTTCAAACCAATTCGTTTCTCTTGTTACATAGAGCCAGTGTTTGGAGAAGGACATGTTTTGATTCTTCCAAATCCACTTGATGAGGGTCCCTTAGGAAGGGTTGTAATAGTGACACTTGAAGAAAAGGAGGCAATTAAGCTTTGTGAAGATGAATTTATTTTACTATTCTCTCCCACCATCTTGATGGAATGTGTCAATAAATAA 1362 0.3759 MATTVSIICKRTVVSTKAIEPGKYLPLSVLDRFMEKNHIRMVYYYQTSGELELGKLTKKLRESLSEMLTHFPIVTGRLVRDEMGLWKIKCSDAGVRTVEAKAKGSVEEWLRNVDREKELELVYWEDMLEKPYYWSTFYVQLTEFEEGGLAIGLSCTHLLADSICATSFMKAWADISLGNKITSPPIFHPLPPQRSQNKKPNSNSNSYMGLISHYKSLLEKPIFIKEAKYTTISMGFSHHMVQACMSMAQSIGSSSPSPTPTPFEALAGLFWVTLSKIKGLKNGLVDMSICLDMRKILGLDQGFFGNSMLYNKVHLEEKLNLNENKFPQATRAIRDVVSKIDNEEIMDLIEWLENNYINSSKMMNGHDLVITSLEDVDPYLAMFQDMFKPIRFSCYIEPVFGEGHVLILPNPLDEGPLGRVVIVTLEEKEAIKLCEDEFILLFSPTILMECVNK 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00726 453 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 431 - -
Trre1g00726 453 Pfam Transferase family 5 428 - -
Trre1g00726 453 Gene3D - 1 207 IPR023213 -
Trre1g00726 453 Gene3D - 224 435 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00726 Trre-Chr1 5451695 5453467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00726 12 410 Acyl Lipid Metabolism Gene Families AT3G23840 24.444 2.80e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00726 - - psat:127096652 749.199