Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00709 ATGAGAAGAAGAATCTGGAATCTTCTTTTCAATAACAATAATTCTAACAAACTAATCCAATTCTCATTCTCGATCCCAATCTCCAATTTTCGCTTCACTGCGTCTCGTTCTTACTGCACCGATCCATCACGCATTCTCAATCATAACCGTCCAGGACCGCTTGTGCAGTACAAAAATCTTGTTGATCAAGGGAAGTTGCAACATGATCCTTACCAAGAAACTGTTGCTATTGAGCTTCAGAATTTGTTAGCAAGGTTGGAGAATTATGAACGACAAATGGAAGAATATCATGTTAATTTATCTAAATGGGAGAATAGTAGGGAGAACGAGCGGCGGAGGATTCTTATGGAGGAAGTTGAGAAGCAGCAGAATGACCAGGATTGGTGGAAGCGTTTGAATAATAAAATCACTGAAAGATGGACGACGAACTCTAGGAAAAGGCCAGATAATGTGGATCCAGGGGTAGGAAAATGGGTGTCGTATCTCAAACGTGAGAAGAAGTTGGATTCACTAGTTGGTCGCCGACCAACTGCTCCTCCAGCTCCCAAAGGACTTTACATATATGGCAATGTGGGCAGTGGGAAGACAATGCTGATGGACATGTTTTATAGTGCCACTGAAGGAATAGTTAAACATCGAAGAAGGTATCACTTTCATGAGGCCATGCTTAGAATAAATGAACATATGCACAAGATATGGAAGAAACAAATGGAGGAGAAGCCTTTGCAGTCGGGCATTGCTGGTTGGATTATGAATCTTCCCTTTGACACTAAAGCTAAAGAGTGGCTGGCTGCAGAAGAAAGATACAAGCAAGAGGTACAGCTGAAAAACATTCTTCCAGCTGTAGCAGATAAGTTTTTTCTGGATCGAGAAGGGGACGAAAAGGGAGCTAGCATTTTGTGCTTTGATGAGATACAGACTGTTGATGTATTTGCTATTGTGGCTTTATCTGGAATTCTAAGCAGATTGTTGAGTAGTGGAACTATTATTGTGGCTACAAGTAATCGAGCACCTAAGGATTTGAATGAGGCTGGTATGGTACCAGAATTCTTCCAAAAACTTCTCTCCAATTTGGAAGAACATTGTGAGACGGTGTTGGTAGGCAGTGAAATTGACTACCGTCGTTTTATTGCACAAAGATCAGTAAACCGGGTAAACTATTTGTGGCCTATTGAAAGGGAAACAATCAATGAATTTGAGAAAAAGTGGCACAATGCAACAGGCACATTTGGAGGAAAAATAATCCCCGAGACAATCTCAGTGATGTTTGGAAGGACACTTGAGGTTCCTGAAAGCTGTGGGGGAGTTGCCCGCTTTACATTTGACTATCTCTGTGGTCGTCCGTTGGGTGCAGCAGATTATATTGCAGTAGCGGAAAACTATCATACTGTCTTCATATCTGATATTCCAGTGATGAGTATGCGCATTCGTGACAAGGCACGGAGGTTTATCACTCTTATTGACGAGTTATACAATCATCATTCTTGTCTATGTTGCTTGGCATCCTCTTCAATTGATGATTTATTTCAAGGAACTGAGGAGGGCACACTTTTTGACTTGGAAAGTTTCCAGTTTGAAACAGAGGCTGAAGGCGGGAAACTTCGCCGGGATGTCTTAGCAGAAGGCAACGTGGGCTCAGGAGGTACTCCTGTTGGCATCACATCCATACTATCTGGTCAGGAAGAGCTGTTTACTTTTCAGAGAGCTGTCTCACGCCTGATTGAAATGCAAACTCCATTATACTTGGATGGAGTCAGTAATTTCCACCCTTATTTTCAGAGGCAACATACAAAAATTCAAAAAAATCGCGACAGCTTACTGTCTGAGTCATAA 1833 0.419 MRRRIWNLLFNNNNSNKLIQFSFSIPISNFRFTASRSYCTDPSRILNHNRPGPLVQYKNLVDQGKLQHDPYQETVAIELQNLLARLENYERQMEEYHVNLSKWENSRENERRRILMEEVEKQQNDQDWWKRLNNKITERWTTNSRKRPDNVDPGVGKWVSYLKREKKLDSLVGRRPTAPPAPKGLYIYGNVGSGKTMLMDMFYSATEGIVKHRRRYHFHEAMLRINEHMHKIWKKQMEEKPLQSGIAGWIMNLPFDTKAKEWLAAEERYKQEVQLKNILPAVADKFFLDREGDEKGASILCFDEIQTVDVFAIVALSGILSRLLSSGTIIVATSNRAPKDLNEAGMVPEFFQKLLSNLEEHCETVLVGSEIDYRRFIAQRSVNRVNYLWPIERETINEFEKKWHNATGTFGGKIIPETISVMFGRTLEVPESCGGVARFTFDYLCGRPLGAADYIAVAENYHTVFISDIPVMSMRIRDKARRFITLIDELYNHHSCLCCLASSSIDDLFQGTEEGTLFDLESFQFETEAEGGKLRRDVLAEGNVGSGGTPVGITSILSGQEELFTFQRAVSRLIEMQTPLYLDGVSNFHPYFQRQHTKIQKNRDSLLSES 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00709 610 FunFam AFG1-like ATPase isoform C 174 375 - -
Trre1g00709 610 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 346 IPR027417 -
Trre1g00709 610 Coils Coil 72 125 - -
Trre1g00709 610 PANTHER ATPASE N2B 43 594 IPR005654 GO:0005524|GO:0016887
Trre1g00709 610 NCBIfam cell division protein ZapE 295 514 IPR005654 GO:0005524|GO:0016887
Trre1g00709 610 Gene3D - 172 375 IPR027417 -
Trre1g00709 610 Pfam AFG1-like ATPase 166 513 IPR005654 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00709 Trre-Chr1 5336075 5343235 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00709 - - mtr:11431777 1083.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00709 1 5336075 5343235 Trre1g00709 1 5336075 5343235 ECH