Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00689 ATGACTTTCTCCGCCGCATCATCTTCTCTTCGTTCTACCTCTTCTCCTTCCTACTCTCAGTTGTTGTGCTCTCTTAGGTACAATAGGAAGCTTCGCAGTCAAATAAATTTTGTTGTGACTCGAGGAAGAAAAGGTCGATGGTTAAGGAATGGTTGTGTTAGTGTTAGATCAGTGTTGAATGACAATAGACCTAGTTTTAACAACTATGGAGCACCGGAATCAGCTAGGCTTCTTGAGAGGTTGTTTGAACAGACAGACAAGATAGATGATAGGGTGACAGGAGAGGAACCAGATCTTGGTGATTTTGAGACGGATCTTTTGGCGGCTCTTATGGAATTGAAGGTGAAGGAGGATCATTTACAAGAAGTGGAGAGAACTGTTTTGTTGGAGAATGGAAAATTGAAGCGTGCTAAAGAGGAATTAGAGCGTCAAGAGAGTGAAATTGAGGCTGCCCGTGAGAAGTATGAGAGGCTTGAAGAGGAGATGAAGGAGGCGAGGACTAGTTTGGTTTCTCAAGTTGGACAGGTAGATGAATTGAAGCTGCGGCTTACGGATCGTGATAATGAAATTGCTGGTTTACGTGATGCGCTGATTTTGAAGGAAGAAGAATTGGAGGAAATGAGAATTGGTTTGGCTAAGAAGAGTGAAGAAGCTGCTTATGTTGATTCTGAGCTTAGAAATAAGGTTCAGCTTCTGAGTGAAGCAAATGAGATTGTGAAGAAACAAGAAATTGAGCTTCAAGAACTTCGGACAGTTGTATTACAAAGAGAAGAAGAACTACGAGTTTCTGCGGCTGAGAGGGAAGTTGAACAAGAAAAGCTCAAGATTGCGGAGGCCTCTTTGGAAAAGCAGGCAATGGAGTGGTTATTAACACAGGGGGAACTTAAGAGACTGGAAGAGGAGGCGTCGAGGCATGCACAGGAGAACAGTGAAACGCTAGAGGATTTCAGAAGGGTGAAAAAGCTTCTCAGTGATGTGAGGTCTGAATTAGTTTCATCTCAGCAATCGCTGGCATCTTCTAGAAACAAAATGGAAGTACAAGAAAAGTTGTTGGAACAGCAGATGGCTGAGCTTTCAGACCAAAGGGAAAGTGTCATGTTGTATATGGAAAATTTAAAAGATGCACAAAGAGAAGTAGAGAGTGAAAGAATGAAACTTGGGGTTGCAGAGGCTTTGAATAAAAAACTCGAACAAGATCTGTCCATGGAGAAGGAGCTCATGAAGAAGTTACAGGAGGAGCTGAAGGAAGAGAGAGCTTCTTTGGAGCAGGCTGTCCATGAATTGTCTTTGCTTCAAGAGGAATTTGATATAAAAAGTGCTGAATTTAAGGAAAAAAGTGCTCTTCTTGATATCAAAGAGTCAGAGCTTGTTGATGCTAGGATAGAAATCCAACATTTGAAATCTGAAAAGGCTTCTCTTCTGGTTCTCTTGGAGGAGAAGGACTTGGAACTTTCCAATGCTAGGAAGATGCTGGCAGAACTAAACCAGGAAATATATGATCTTAAGATGCTTATGAACAATAAAGAAACACAGCTTATTGAAGCAACCAATATGTTAAGGGAGAAAGATGAGCATGTGAAGATGATCCAGAATAAGTTGAATAATACAAACCTGAAGGCTTTTGAGGCTGAAACTGTAGTAAACCGAGTTTTAGATCTCACAAACAAACTGGTTGCTTCCATTAAGAATGAAGAGATCAATTCATCAAGACCACTAGATGAAATGGGTGATCAACTAATGACGCAACTTATGGAGGATCCTACTAATGAATTGAGTTGGCAACAAAAACGGCTGGAGAATGTGCTCGAGCTGACCAAGGAAAACTTGAAAACAAAGGAGATGGAAGTTCTTGCTGCACAGAGGGCTCTAATAATAAAAGAAGAGGAGCTTAAAATGACTCTTGCAAGGTTGGAAGCAAAAGAGGAAGAGTTAAGAGGAGCTAAGGACAAGGCGACAGAAGATGCCAATGATCATAATAGGTTGTATGCTATGACGCAGGAGAGACTCGATGAGAATAACATGGAGGACTTGGCAATCGAGAAGCTTCAGCTTGAGGCAGCACAGCTTGAAGTTGAAGCTGCTACTAGTGCTCTACAGAAAATTGCAGAAATGAGTCAACAACTTTTGAATAAAGCCATTCCGAGTGTTAAAGCTGATAGCTATGTCAGTGCCATGCAAAATAACAATGATATTAAACTTGATCTAATGACAAATATCAATTGCATTGACTGTTTGGCTGTGGTGAAAGAAGGAGTTGCTCGACTCTCGGCATTGACAGAACAGCTTGTAATGGATGCAGGTCTTCCTGCTGCAAGCTAG 2319 0.4135 MTFSAASSSLRSTSSPSYSQLLCSLRYNRKLRSQINFVVTRGRKGRWLRNGCVSVRSVLNDNRPSFNNYGAPESARLLERLFEQTDKIDDRVTGEEPDLGDFETDLLAALMELKVKEDHLQEVERTVLLENGKLKRAKEELERQESEIEAAREKYERLEEEMKEARTSLVSQVGQVDELKLRLTDRDNEIAGLRDALILKEEELEEMRIGLAKKSEEAAYVDSELRNKVQLLSEANEIVKKQEIELQELRTVVLQREEELRVSAAEREVEQEKLKIAEASLEKQAMEWLLTQGELKRLEEEASRHAQENSETLEDFRRVKKLLSDVRSELVSSQQSLASSRNKMEVQEKLLEQQMAELSDQRESVMLYMENLKDAQREVESERMKLGVAEALNKKLEQDLSMEKELMKKLQEELKEERASLEQAVHELSLLQEEFDIKSAEFKEKSALLDIKESELVDARIEIQHLKSEKASLLVLLEEKDLELSNARKMLAELNQEIYDLKMLMNNKETQLIEATNMLREKDEHVKMIQNKLNNTNLKAFEAETVVNRVLDLTNKLVASIKNEEINSSRPLDEMGDQLMTQLMEDPTNELSWQQKRLENVLELTKENLKTKEMEVLAAQRALIIKEEELKMTLARLEAKEEELRGAKDKATEDANDHNRLYAMTQERLDENNMEDLAIEKLQLEAAQLEVEAATSALQKIAEMSQQLLNKAIPSVKADSYVSAMQNNNDIKLDLMTNINCIDCLAVVKEGVARLSALTEQLVMDAGLPAAS 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00689 772 Coils Coil 449 469 - -
Trre1g00689 772 Coils Coil 120 175 - -
Trre1g00689 772 Coils Coil 337 434 - -
Trre1g00689 772 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 102 706 - -
Trre1g00689 772 Coils Coil 595 657 - -
Trre1g00689 772 Coils Coil 295 315 - -
Trre1g00689 772 Coils Coil 477 511 - -
Trre1g00689 772 Coils Coil 232 282 - -
Trre1g00689 772 Coils Coil 672 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00689 Trre-Chr1 5215967 5218919 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00689 - - gmx:100789623 882.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00689 1 5215967 5218919 Trre1g00689 1 5215967 5218919 ECH