Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00677 ATGGGTTTCAGATACAAAGCAGGATTGTTCCTTATAGGTACTGTTGTTATCATTTGGGTCTCTTCTGCTGAAGTCACCCAGGATATTTATACAGATTATAAGCAGCCATTTGCGGTGACATATCTTGGAGCTTCTCTTATGGTAGTTTACCTCCCAATAGCATTCATTAAGGATTGGTTCTATAACTTGCTTAAACACCGGTCTTCTAAAAGTGGAAATAATGCAGACAGTAGCTCCCCATTCAAAGGAAATGGTGTGCAGAAAATGTTTGAAATGGAACAAGGGATTGTGGCTCGAAAAGACAGTGATTTAGACCTTACATCTCTTGCAGAGAAAGCACCATTGGTAGCTAAGTATAATGAAACTAGTATACCAAAGGAAGAAAAAGAACTTACTACAAAGGAAATTGCTACTTATGGATTTTACATTGCACCTATCTGGTTTATAACAGAGTATCTATCAAATGCTGCGCTTGCACGTACAAGTGTTGCGAGTACAACAGTTTTGTCATCTACTTCAGGACTATTCACTCTTTTCATCGGTGTGTTAATGGGCCAAGACACTATAAATGTATCAAAAGTAGTTGCTGTCTTGGTCAGCATGGCCGGGGTTGCCATGACGACTCTAGGCAAAACTTGGGCTGCAGATGACTCACAACTTAGTGCTTCCAATGGACCGCGCTCTCTTGTTGGAGATCTTTTTGGCCTTCTCTCAGCCATGTCATATGGTCTATTTACTGTTCTTCTGAAAAAGTTTTCTGGCGAAGAAGGTGAACGGGTTGATGTGCAAAAGCTGTTTGGATATATTGGATTGTTTACACTTGTAGCACTATGGTGGCTTATCTGGCCGTTATCGGCCTTAGGAATTGAACCTAAGTTTGCGATTCCCCACTCAGCCAAAATGGACGAAGTGGTTCTTGCAAATGGGTTTGTTGGAAGTGTTCTCTCAGACTACTTTTGGGCACTCTGTGTTGTGTGGACAACTCCCCTTGTGGCAACTTTGGGCATGTCACTCACCATTCCACTTGCTATGATAGCTGACATGGTAATCCACGGTCGGCATTATTCAGCATTATACATTCTTGGCTCAGTTCAGGTATTTGCAGGGTTTGTGATAGCTAATATTTCAGATTGGATGTCAAAAAGGTTTGGATTATAG 1158 0.4145 MGFRYKAGLFLIGTVVIIWVSSAEVTQDIYTDYKQPFAVTYLGASLMVVYLPIAFIKDWFYNLLKHRSSKSGNNADSSSPFKGNGVQKMFEMEQGIVARKDSDLDLTSLAEKAPLVAKYNETSIPKEEKELTTKEIATYGFYIAPIWFITEYLSNAALARTSVASTTVLSSTSGLFTLFIGVLMGQDTINVSKVVAVLVSMAGVAMTTLGKTWAADDSQLSASNGPRSLVGDLFGLLSAMSYGLFTVLLKKFSGEEGERVDVQKLFGYIGLFTLVALWWLIWPLSALGIEPKFAIPHSAKMDEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMIADMVIHGRHYSALYILGSVQVFAGFVIANISDWMSKRFGL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00677 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 134 211 - -
Trre1g00677 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 270 379 - -
Trre1g00677 385 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 4 381 - -
Trre1g00677 385 Pfam EamA-like transporter family 129 208 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00677 Trre-Chr1 5109965 5113146 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00677 K15289 - gmx:100792013 620.542