Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00676 ATGGATACATTGCCGACGACATCCACGGCGGCGAAGCGTGGAGGAGGAGGAGGAGGAAGATCCAAAGTTGCTCAAACATCAAAACCTTCTCTCCTATTAGCCTTCTTCTCTTGTGTTGCTTGGCTTTACGTTGCCGGCAGGTTATGGCAAGATGCTGAGAATCGAAATTTACTTGCTAGTCTTCTCAAGAAGAATTCAGCACAGAGACCTAAGGTTCTTACGGTGGAAGATAAGTTAATGGTACTAGGGTGCAGGGATCTGGAGAAGAGGATCGTGGAAGCTGAGATGGATTTGACATTGGCTAAGAGTCAAGGGTACCTTAAAGGCCAGCGGCTGCAAACCGCCTATTCTTCTGACCGTAGGCTTCTTGCTGTTATTGGAGTGTATACTGGTTTTGGAAGCCGATTGAAAAGGAATGTATTCAGAGGGTCTTGGATGCCTAAAGGTGATGCCATGAAAAAACTTGAAGAAAGAGGAGTGGTCATACGTTTTGTAATTGGTCGGAGTCCTAATCGAGGTGATAGCTTGGATCGCAGTATTGATGAGGAAAACCGCTCAACAAAGGATTTCTTGATTCTTGAAAGTCACGAAGAAGCTCAAGAAGAGTTGCCTAAAAAAGCAAAAATCTTCTTTAGTACTGCAGTTCAGAACTGGGATGCTGATTTTTATGTGAAAGTTGATGACAGTATTGACATTGATCTGGAGGGGTTAATTGCACTTCTTGACCGTCGCCGTGGCCAGGATGGCTCATATATTGGATGCATGAAGTCAGGAGACGTGGTATCAGAAGAGGGAAAGCTTTGGTATGAACCTGATTGGTGGAAATTTGGGGATGAAAAATCGTATTTCCGACATGCAGCTGGTTCACTTGTTATACTTTCAAAGAATTTGGCACAGTACATTAACATAAACAGTGTATCTTTGAAGACCTATGCCTATGATGATACATCATTGGGATCATGGATGATGGGCATCCAATCAACATATATTGACGACAGTCGCCTTTGCTGCAGTAGCATCAGCCAAGATAAGCTATGCTCGGTGGCTTGA 1050 0.439 MDTLPTTSTAAKRGGGGGGRSKVAQTSKPSLLLAFFSCVAWLYVAGRLWQDAENRNLLASLLKKNSAQRPKVLTVEDKLMVLGCRDLEKRIVEAEMDLTLAKSQGYLKGQRLQTAYSSDRRLLAVIGVYTGFGSRLKRNVFRGSWMPKGDAMKKLEERGVVIRFVIGRSPNRGDSLDRSIDEENRSTKDFLILESHEEAQEELPKKAKIFFSTAVQNWDADFYVKVDDSIDIDLEGLIALLDRRRGQDGSYIGCMKSGDVVSEEGKLWYEPDWWKFGDEKSYFRHAAGSLVILSKNLAQYININSVSLKTYAYDDTSLGSWMMGIQSTYIDDSRLCCSSISQDKLCSVA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00676 349 Gene3D - 153 338 - -
Trre1g00676 349 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 96 328 IPR002659 GO:0006486|GO:0016020|GO:0016758
Trre1g00676 349 FunFam Hexosyltransferase 140 335 - -
Trre1g00676 349 Pfam Domain of unknown function (DUF4094) 27 104 IPR025298 -
Trre1g00676 349 Coils Coil 84 104 - -
Trre1g00676 349 MobiDBLite consensus disorder prediction 1 23 - -
Trre1g00676 349 Pfam Galactosyltransferase 137 326 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00676 Trre-Chr1 5081982 5087330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00676 80 349 Glycosyltransferase AT2G25300 78.519 1.02e-163 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00676 K20854 - gmx:100816327 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00676 1 5081982 5087330 Trre1g00676 1 5081982 5087330 ECH