Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00674 ATGGTTACCAAAGTCAGAAAACCATCTCATGCTGGTTCTTGGTACACTGACAATCCTAAGCAGCTTTCAGAAGAACTGGAAGGATGGCTGAATTCATGTGGTTTAACCAAATCTTCTGATGTACGGGGTGTAATAGCACCACATGCAGGTTATTCCTATTCAGGACGAGCTGCTGCATACGCTTTTGGAAACATTGATCCATCTAACATTAAACGTGTTTTCCTACTTGGTCCTTCTCACCACTATTATACTCCAAAATGTGCTCTTTCAACTGCAACAGTCTACAAGACACCCATTGGTGACCTGCCTATTGATTTGGAAGTAAATGAGCAGCTTAAAGCTACAGGAAATTTTGAAACGATGGATATTCGAGTTGATGAAGCTGAACATAGCATGGAAATGCACTTGCCATATCTTGCTAAAGTATTTGAAGGGCACCCGGTGAAAATTGTACCTATTTTAGTTGGTGCTGTTAGTGCTGAGAATGAAGCTATGTATGGACAGATTCTTGCTCAGTTTGTTGACGACCCCACTAATTTCTTTTCTATTTCATCAGATTTCTGTCATTGGGGATCTCGATTCAACTACACGCACTATGACAAAAAACATGGGCCTATTTACAAATCCATTGAGGCCTTGGACAAGATGGGCATGGATATCATAGAAACTGGAGACCCCGATTCATTCAAAAAGTATCTGTCAGAGTATGACAATACAATCTGTGGACGCCATCCAATTAGTGTTTTTCTCCATATGCTGAAGAACTGTTCAACAAAAATAAAAATCAACTTTCTTCGCTACGAGCAGTCCAGCCAGTGCCATAGTACAAGGGATAGTAGTGTTAGTTATGCATCTGCAGCAGCAAAGGTTGATGATTCAAGCTCTATTTGA 891 0.4052 MVTKVRKPSHAGSWYTDNPKQLSEELEGWLNSCGLTKSSDVRGVIAPHAGYSYSGRAAAYAFGNIDPSNIKRVFLLGPSHHYYTPKCALSTATVYKTPIGDLPIDLEVNEQLKATGNFETMDIRVDEAEHSMEMHLPYLAKVFEGHPVKIVPILVGAVSAENEAMYGQILAQFVDDPTNFFSISSDFCHWGSRFNYTHYDKKHGPIYKSIEALDKMGMDIIETGDPDSFKKYLSEYDNTICGRHPISVFLHMLKNCSTKIKINFLRYEQSSQCHSTRDSSVSYASAAAKVDDSSSI 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00674 296 CDD MEMO_like 7 278 IPR002737 -
Trre1g00674 296 Hamap MEMO1 family protein <locus_tag>. 4 289 IPR002737 -
Trre1g00674 296 PANTHER PROTEIN MEMO1 4 290 IPR002737 -
Trre1g00674 296 Pfam Memo-like protein 8 286 IPR002737 -
Trre1g00674 296 Gene3D - 4 291 - -
Trre1g00674 296 NCBIfam AmmeMemoRadiSam system protein B 6 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00674 Trre-Chr1 5068626 5070934 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00674 K06990 - gmx:100815790 522.702