Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00663 ATGGAACCAGAAGTAAGCATCGAAGGATCATCTATGATCCAAATCGCCGTCATTCCGATCGGAACAGTACCACCCAACGTCCTCCGTGACTACTACTCAATGCTCCTTCCTCTCCACACGATTCCTCTCTCTGCAATCAGTTCCTTCTACACTGAACACCAGAAATCACCCTTCGCTAATCAACCTTGGGATTCCGGTTCACTCCGGTTCAAATTCGTCCTCGGCGGTTCTACTCCAAGTCCATGGGAAGATTTTCAATCTCACCGTAAAACTCTCGCTGTTGTTGGCATTGTTCATTGTCCTTCTTCGCCGGATCTCGACGCTGTTATCGATCAATTCTCAAATTCTTGTAAATCTTATCCTTCTTCACTTGTGGATCGTTGCTTTGCTTTTTACCCTAACGATTCTCAGCTTGATGATGGAAGTAAGAGAGATGGAAATTTGAGATTGTTTCCGCCGGCGGATCGGTCGACATTAGAGTTTCATTTGAACACTATGATGCAAGAAGTAGCTGCTTCTTTGCTTATGGAGTTTGAGAAATGGGTGCTTCAAGCGGAATCTTCTGGAACTATTCTCAAGACGCCACTGGATTCTCAAGCTAGTCTCAGCTCAGAGGAGGTTATCAAGGCCAAAAAGAGGAGACTTGGGCGTGCTCAGAAGACGATTGGCGATTACTGCTTGCTGGCAGGTTCTCCTGTTGATGCTAATGCTCATTATTCCACTGCATTAGAACTTGGCAGGTTGACTGGGGATTTCTTCTGGTATGCTGGAGCATTGGAGGGTAGTGTTTGTGCCTTGCTGATTGACCGTATGGGCCAGCAAGATTCAGCTGTGGAGGAGGAAGTTAGATATCGTTATAATAGTGTCATATTGCATTACAAGAAGTCACAAGATAATACCCAGCGAGTTTCTCCCATAACTTTTGAACTTGAAGCTACTTTGAAATTAGCAAGGTTCCTCTGCAGGAGAGAGCTGGCCAAGGAGGTAGTGGAGTTGTTAACCACAGCTGCAGATGGGTCTAAATCTTTAATTGATGCAAGCGATCGACTCATATTATACATTGAAATAGCTCGTTTGTATGGCAGCCTTGGATACCAGAGAAAAGCCGCTTTCTTTTCAAGGCAGGTTGCTCAGTTATATTTGCAGCAAGAAAATAGGCTGGCTGCAATTAGTGCTATGCAAGTTTTGGCAATGACCACTAAAGCTTATCATGTTCAAAGTAGATCATCAGTCTCCGATCATTCTATTCATAATAAGGGAACTGGCTCAGATAAAGCTGATGCTGGGAAAATATATCACCAATCAGTTGTCTCATTGTTTGAGTCTCAATGGAGTACCATCCAGATGGTTGTATTAAGAGAAATTCTGCTCTCTGCAGTTCGTGCCGGAGATCCTCTTACTGCATGGAGTGCAGCGGCACGACTACTTAGGTCCTACTATCCTCTAATAACTCCTGCTGGGCAAAATGGTCTTGCTAATGCACTTTTGAATTCGTCTGAGAGGCTACCACCAGGGACTCGTTGTGCTGATCCCGCTTTACCTTTTATAAGGGTTCATTCCTTTCCTGTCCACCCAACACAAATGGACATCGTAAAACGTAATCCTGCTAGGGAAGACTGGTGGGCAGGTTCTGCTCCTTCAGGCCCTTTCATTTACACCCCATTCAGTAAAGGAGATACAACTAATATTAAGAAGCAAGAGCTTATTTGGGTTGTTGGAGAGCCGATCCAGGTTTTAGTGGAATTGGCAAACCCGTGTGGCTTTGATTTAAGAGTCGATAGCATCTATCTGTCTGTGCATTCAGGAAATTTTGATGCTTTTCCTGTGAGCATAAGCCTTCTACCAAATTCTTCAAAAGTGATTACCTTATCTGGTATTCCAACATCAGCGGGGCCAGTTACAATTCCTGGGTGCATTGTTCATTGTTTTGGTGTTATTACCGAACACCTGTTTAGAGAGGTTGACAATCTGCTTCTTGGGGCTGCACAAGGGCTTGTCCTTTCTGACCCTTTTCGATGCTGTGGATCTCCTAAGTTGAAGAATGTATCTGTTCCAAGTATTTCTGTAGTACCTCCCCTTCCATTGCTGATATCACATGTTGTTGGAGGTGATGGGGCCATCATTTTGTACGAAGGAGAAATTCGTGATGTGTGGATAAGTCTGGCTAATGCAGGCACAGTTCCAATTGAGCAGGCACATATTTCACTGTCAGGGAAAAATCAAGATTCCGTAATTTCATATTCTTCTGAAACATTAAAATCCAGCCTCCCTCTGAAGCCTGGAGCCGAAGTGACATTCCCAGTGACTTTGCGAGCCTGGCAGGTTGGCGTGGCAGATGCTGATAATACGAGGCATTCCAAAGATGGAAGTTGTCCATCACTATTGATCCACTATGCCGGTCCACTAAAAACCTCTGAAGATCCAAATGCTATATCCCCCGGTAGACGCCTTGTTGTTCCCCTGCAGATTTGTGTTTTGCAGGGTTTGTCTTTTGTTAAGGCTCAATTGCTTTCAATGGAATTTCCTGCTCATGTTAGTGAAAATCTTCCCAAGTTAGATGATGTAAATAATAATTCTACTGGAGGACATGTTAACTCAGAGTCAAAAATGGACAGATTGGTGAAAATAGATCCTTTCAGAGGAAGCTGGGGACTGCGGTTTCTAGAACTTGAGCTGTCAAATCCAACTGATGTCGTGTTTGAAATCAATGTCTCTGTCAAACTGGAAAACGGCAGTAATGAGGACAACCATTTAGCTGATCAGGATGCTACAGAATATGGTTATCCTAAAACAAGAATCGATAGAGATTGCTCAGCAAGGGTTCTTGTGCCTCTTGAGCATTTTAAATTACCTGTTCTTGATGATTCCTTTTTATCGAAGGACACTCAGACAGATGGGAGTGGTGGAGGAAGAAATACATCATTCTCTGAAAAGAGCAGCAAAGCCGAACTCAATGCTTGTATTAAGAACCTTGTATCTAGGATTAAGGTTCAATGGCACTCAGGACGCAATAGCTCTGGAGAGTTAAATATCAAGGATGCTATCCAGGCTGCTCTACAGACATCAGTCATGGACGTGTTGCTGCCAGATCCACTGACATTTGGCTTCAAGCTTCTTAGAGAGGGTTTTGAATCGAATAGTCCTGACCCTGTTAAAGAATCTGATTTACCTGAATCCCCTGCTTCAAAAAGTTCTGTTCTTGCACATGAAATGACACCAATGGTAGTTGTGGTCCGTAATAACACAAAGGATATGATCAAAATTAATCTTAATATTACATGCAGAGATGTATCTGGGGAGAACTGTGTAGATGGTACCAAATCAACTGTTCTATGGACTGGTGTTCTGAGTGAAATTACCATTGAAATTCCCCCACTTCAACAAATCAAACATTCTTTCTGTCTGCATTTCCTTGTCCCAGGAGAATATACCCTACTCGCTGCAGCAGTGATCGATGATGCGAATGACATCCTTCGGGCTCGTGCTAGGGCATCTTCAGCTGCCGAGCCTATTTTTTGTCGTGGACCACCATATCACCTTCGTGTCCTTGGGAATGCATGA 3561 0.4364 MEPEVSIEGSSMIQIAVIPIGTVPPNVLRDYYSMLLPLHTIPLSAISSFYTEHQKSPFANQPWDSGSLRFKFVLGGSTPSPWEDFQSHRKTLAVVGIVHCPSSPDLDAVIDQFSNSCKSYPSSLVDRCFAFYPNDSQLDDGSKRDGNLRLFPPADRSTLEFHLNTMMQEVAASLLMEFEKWVLQAESSGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYSTALELGRLTGDFFWYAGALEGSVCALLIDRMGQQDSAVEEEVRYRYNSVILHYKKSQDNTQRVSPITFELEATLKLARFLCRRELAKEVVELLTTAADGSKSLIDASDRLILYIEIARLYGSLGYQRKAAFFSRQVAQLYLQQENRLAAISAMQVLAMTTKAYHVQSRSSVSDHSIHNKGTGSDKADAGKIYHQSVVSLFESQWSTIQMVVLREILLSAVRAGDPLTAWSAAARLLRSYYPLITPAGQNGLANALLNSSERLPPGTRCADPALPFIRVHSFPVHPTQMDIVKRNPAREDWWAGSAPSGPFIYTPFSKGDTTNIKKQELIWVVGEPIQVLVELANPCGFDLRVDSIYLSVHSGNFDAFPVSISLLPNSSKVITLSGIPTSAGPVTIPGCIVHCFGVITEHLFREVDNLLLGAAQGLVLSDPFRCCGSPKLKNVSVPSISVVPPLPLLISHVVGGDGAIILYEGEIRDVWISLANAGTVPIEQAHISLSGKNQDSVISYSSETLKSSLPLKPGAEVTFPVTLRAWQVGVADADNTRHSKDGSCPSLLIHYAGPLKTSEDPNAISPGRRLVVPLQICVLQGLSFVKAQLLSMEFPAHVSENLPKLDDVNNNSTGGHVNSESKMDRLVKIDPFRGSWGLRFLELELSNPTDVVFEINVSVKLENGSNEDNHLADQDATEYGYPKTRIDRDCSARVLVPLEHFKLPVLDDSFLSKDTQTDGSGGGRNTSFSEKSSKAELNACIKNLVSRIKVQWHSGRNSSGELNIKDAIQAALQTSVMDVLLPDPLTFGFKLLREGFESNSPDPVKESDLPESPASKSSVLAHEMTPMVVVVRNNTKDMIKINLNITCRDVSGENCVDGTKSTVLWTGVLSEITIEIPPLQQIKHSFCLHFLVPGEYTLLAAAVIDDANDILRARARASSAAEPIFCRGPPYHLRVLGNA 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00663 1186 MobiDBLite consensus disorder prediction 1045 1064 - -
Trre1g00663 1186 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1179 IPR013935 -
Trre1g00663 1186 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 327 743 IPR013935 -
Trre1g00663 1186 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 201 279 IPR013935 -
Trre1g00663 1186 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 10 191 IPR013935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00663 Trre-Chr1 4995572 5002456 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00663 K20306 - gmx:100784850 2093.55