Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00630 ATGCAGGAGGAAAAAAATCAAGAAGATTCAATTTGTGAATCTGATGAACAAAATGAAGAAAAAAAGTCAAAGGGTGTTTGGATTTGTAACATTTTTTGTATTCCAATTCATTGGTTTAAAATGCTTTCAAGAGAAATGCATTGGAGTTTTGTTTTAGGAGTTGTTGTTGTTTATGGAATAAGTCAAGGTGTTGGTGGTGCTCTTGCTGGTGTTGGAACAAAATATTATATGAAAGATGTTCAGAAAGTTCAACCTTCTGAAGCACAAGTTTATGCTGGAATCACTTCTATTCCTTGGATTGTTAAGCCTTTATGGGGTCTTCTTACTGATGTTCTTCCTATTTTTGGATACCGTAGAAGACCTTATTTCATTTTTGCTGGTTTATTAGGAGCAATTGCCATGCTTTTGTTATCTTTCCATGAAAACCTGCATCTTGTGTTGGCACTTTTAGCATTAACAGCAGGGAGTGCTGGTGTTGCAATAGCCGACGTGACCATTGATGCATGTGTTGCACAGAACAGCATCTCTCATCCTTCACTTGCTGCCGATATGCAAAGTTTATGTGCCTTTAGTTCTTCTGTTGGAGCACTGTTAGGATTCTCCGTTAGTGGCATCTTTGTTCACCTTATAGGCCCTATGGGAGTATTTCGTTTGTTGACTATTCCGGCGGGACTTGTAATTTTGGTTGGTTTTTTGCTTGACGAGCCTCGTATGGAAAACTTCTCTTACAGACAGGTGAACCAAAATTTTGTGGATGCTGGCAAGGCTATGTGGACTACATTGAAGAGTGAAGATGTATGGAGGCCGTGTTTATACATGTATTTATCCCTTGCACTAAGTTTGAATATCCTTGAAGGAATGTTTTACTGGTATACAGACTCGAAAGAAGGGCCATCTTTCTCGCAGGAGAGTGTAGGTTTCATATTTTCAATCAGTTCAGTCGGTTCTCTTCTAGGCGCAATACTATACCAATACGCGCTAAAGGATTACGCGTTCAGAGACTTACTCTTTTGGACTCAGTTACTCTATGGTCTATCAGGGATGTTTGATCTGATTTTAGTCTTGAGATTGAACCTCAAATTCGGTATACCAGATTACGTCTTTGTTGTAATCGTCGAAAGCATAGCTCAAATGACAAATCGACTAAAGTGGATGCCAATGCTTGTACTAAGTTCAAAGCTTTGTCCTTCTGGTATTGAAGGAACATTCTTTGCTCTATTAATGTCAATCGATAACGTTGGAGTTCTATCATCTTCATGGGGTGGTGGATTGGTACTTCATGTCCTAAAGATCACAAGAACAAAATTTGATAACATTTGGTTGGCGATTTTGATTCGGAACATTTTACGACTCACTCCACTTTGTTTGCTTTTTTTGGTGCCTCGAGTTGATCCAAACTCTTTCATTCTTCTTCCGAAAGAAAATGTGGATCCAAAGGTGGTTCCTATTGACACTTCAGAAACAAAAGATGTTGAATTGATGTCCCTTGTACACAGTGTTGATGGTAATATATAA 1515 0.3861 MQEEKNQEDSICESDEQNEEKKSKGVWICNIFCIPIHWFKMLSREMHWSFVLGVVVVYGISQGVGGALAGVGTKYYMKDVQKVQPSEAQVYAGITSIPWIVKPLWGLLTDVLPIFGYRRRPYFIFAGLLGAIAMLLLSFHENLHLVLALLALTAGSAGVAIADVTIDACVAQNSISHPSLAADMQSLCAFSSSVGALLGFSVSGIFVHLIGPMGVFRLLTIPAGLVILVGFLLDEPRMENFSYRQVNQNFVDAGKAMWTTLKSEDVWRPCLYMYLSLALSLNILEGMFYWYTDSKEGPSFSQESVGFIFSISSVGSLLGAILYQYALKDYAFRDLLFWTQLLYGLSGMFDLILVLRLNLKFGIPDYVFVVIVESIAQMTNRLKWMPMLVLSSKLCPSGIEGTFFALLMSIDNVGVLSSSWGGGLVLHVLKITRTKFDNIWLAILIRNILRLTPLCLLFLVPRVDPNSFILLPKENVDPKVVPIDTSETKDVELMSLVHSVDGNI 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00630 504 SUPERFAMILY MFS general substrate transporter 51 461 IPR036259 -
Trre1g00630 504 NCBIfam folate/biopterin family MFS transporter 37 465 IPR004324 GO:0016020
Trre1g00630 504 CDD MFS_FBT 53 458 - -
Trre1g00630 504 Pfam BT1 family 62 229 IPR039309 -
Trre1g00630 504 Pfam BT1 family 272 462 IPR039309 -
Trre1g00630 504 Gene3D MFS general substrate transporter like domains 43 445 IPR036259 -
Trre1g00630 504 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 36 474 IPR039309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00630 Trre-Chr1 4770528 4774038 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00630 - - ccaj:109816000 832.017