Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00540 ATGGGTTTTGAAACGGTTACGCGCGTGGCTTCACGCACTTCTGTGTTATTTGACGCGCCGGGGGATCATGATGATCATCAGGGGAAGGTTTTGTCTGACGAGGTTTGCAGTACGACGTCGTCTTCATCGATCGGAAGAGATAGTGATGATGACGTGTCATCGGAGAGATCAATGGATGAGAATGAAAATGAAGCTCAAAGTAAATACAATGGTGGTGCTTTAGATGCCATGGAAGCTTTAGAACAAGTTCTTCCTATCAGGAGAGGTATTTCAAACTACTATAATGGTAAATCCAAATCCTTCACAAGCCTAGCTGATGTTGTCACAACACCATCTGTAAAAGATATTGTGAAACCAGAGAATGCGTACACGAGGAGACGCAGAAATTTGATGGCTTTCACCAATGTTTGGGACAAGAATAGAAACTCCCCTTTGAGAAGCAATGGTGGTGGAATTTCCAAGAGAACAATGAGTTTAAGTAGAAGTTCTTTAGCTCTTGCAGTTGCAATGTCAAATTCTGATAGTAACTCTAGTATTTCAAGTGATGATTCACCTTCTACAAGCTCAAATTCTTCAACACCTTCATCATCGCTTCCGCCACTTCATCCGCGAAATAGAGTGTCTTCTTTAGCATCTCCTTTGCAGAGGAATTTCTTTTCCTTGGCTGATCTGCATCATTGTGCCATTGCTGCATCAATGAAGATGTCAAGTTCTTCACTTGGACATGAAACAGCTCATCATCCATCTTAG 750 0.42 MGFETVTRVASRTSVLFDAPGDHDDHQGKVLSDEVCSTTSSSSIGRDSDDDVSSERSMDENENEAQSKYNGGALDAMEALEQVLPIRRGISNYYNGKSKSFTSLADVVTTPSVKDIVKPENAYTRRRRNLMAFTNVWDKNRNSPLRSNGGGISKRTMSLSRSSLALAVAMSNSDSNSSISSDDSPSTSSNSSTPSSSLPPLHPRNRVSSLASPLQRNFFSLADLHHCAIAASMKMSSSSLGHETAHHPS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00540 249 MobiDBLite consensus disorder prediction 32 47 - -
Trre1g00540 249 MobiDBLite consensus disorder prediction 14 71 - -
Trre1g00540 249 MobiDBLite consensus disorder prediction 48 63 - -
Trre1g00540 249 PANTHER OS08G0516900 PROTEIN 28 227 - -
Trre1g00540 249 MobiDBLite consensus disorder prediction 173 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00540 Trre-Chr1 4023489 4025295 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00540 - - gmx:100499733 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00540 1 4023489 4025295 Trre1g00540 1 4023489 4025295 ECH