Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00534 ATGTGGGAATCGATTCTGTTAACGGTGGCTGCAACCGCCGGTAACAACATCGGAAAAATCCTTCAGAAAAAGGGCACCATCATTCTCCCCCCTCTCTCCTTCAAGTTCAAGGTTATTAGGGCTTATGCTTTGAACAAAACATGGTTGATAGGTTTTCTGATGGATATTTTTGGGGCATTATTGATGTTAAGGGCATTGTCTCTGGCTCCAGTCTCTGTTATCCAACCGGTATCTGGCTGTGGACTAGCAATTCTATCAATCTTTTCTCATTTTTATCTCCAAGAAGTTATGAATGTTGTTGATTGGGTTGGAGTTACCTTGGCAGGCTTTGGCACAATAGGAGTTGGTGCTGGTGGCGAGGAGCAGCAAGAGGCAGTTGCTCTATCTATTTTTCACATACCATGGCTGGTATCCGTTGTTTCCATCTTGTTTATACTGCTTAATGGATGGCTTCGAATATACAAGCGTCAGCGAAGAGAACAAGAGATGATGGAATATGATGTTATCGAGGAAATCATTTATGGCTTGGAATCTGGTATTTTGTTTGGGATGTCATCTGTAATATCAAAGATGGGATTTCTATTCCTTGAGCAAGGTTTTCATAAGCTGCTGGTTCCTATATGCCTCTTGATCAGCGTGTCTTGCAGTGGTATCGGCTTTTACTATCAGACACGTGGCCTAAAGCATGGCAGGGCTATTATAGTTTCTACATGTGCTGCTGTGGCATCCATTTTGACTGGTGTACTTGCTGGGATGCTTGCGTTGGGTGAGCAGCTTCCTTCTGCTCCCAAAGCTCGTCTAGTGCTCCTTCTTGGATGGCTACTTATAATTACGGGTGTGATTTTGCTCGTTGGTTCAACAAAACTAGTGAGATTCCTCGCTTCTACGCGGCGAACAAGAAGCAATGCGGAAAAGAGTTATGGCCCTAGAAGATCCACTTCTTCCCGTGTAAGGGAGCCAAGTCCTACTAGTGCTGTCATTCAAGCGGCAACATTAAATCATCTGCTATCGTCGTCTTCCAAAGAAAAAGCTTGA 1035 0.4406 MWESILLTVAATAGNNIGKILQKKGTIILPPLSFKFKVIRAYALNKTWLIGFLMDIFGALLMLRALSLAPVSVIQPVSGCGLAILSIFSHFYLQEVMNVVDWVGVTLAGFGTIGVGAGGEEQQEAVALSIFHIPWLVSVVSILFILLNGWLRIYKRQRREQEMMEYDVIEEIIYGLESGILFGMSSVISKMGFLFLEQGFHKLLVPICLLISVSCSGIGFYYQTRGLKHGRAIIVSTCAAVASILTGVLAGMLALGEQLPSAPKARLVLLLGWLLIITGVILLVGSTKLVRFLASTRRTRSNAEKSYGPRRSTSSRVREPSPTSAVIQAATLNHLLSSSSKEKA 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00534 344 Pfam Magnesium transporter NIPA 18 284 IPR008521 GO:0015095|GO:0015693|GO:0016020
Trre1g00534 344 MobiDBLite consensus disorder prediction 303 323 - -
Trre1g00534 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 199 286 - -
Trre1g00534 344 Gene3D - 4 118 - -
Trre1g00534 344 PANTHER UNCHARACTERIZED 2 305 IPR008521 GO:0015095|GO:0015693|GO:0016020
Trre1g00534 344 FunFam Probable magnesium transporter 5 119 - -
Trre1g00534 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 25 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00534 Trre-Chr1 3958151 3962135 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00534 - - gmx:100803982 539.65