Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00520 ATGGGTGATTCAGTTACACAAAGGAGAATGAGCGTAACAAACTACCACGGAGAAAATCTCGTCGGCATATTACACGATGCGTCTTCCACTTCACTAGTTATCGTCTGCCATGGTTTTCAATCTTCCAAGGAAAGGATCCCCATGGTGAACCTTGCTGCTGCTCTGGAAAAAGATGGAATCAGTGCCTTCCGATTTGACTTTGCAGGAAATGGGGAAAGTGAAGGTTCATTTCAGTATGGTAACTACTACAGAGAAGTTGAAGACCTGCGAGCTATAGTGCAACACTTCCGTGAGAAGAAATATATAATTACTACAATTGTTGGTCATAGTAAAGGGGGTAATGTGGTTCTGTTATATGCTTCAAAATATAAGGATATTCATACTGTTGTCAATATATCTGGCCGGTTTAACCTAGCAAGAGGTATGGAGAGTCGCTTGGGTGAAAATTTTATACAAAAGATCAAACAAGATGGATTTATAGATGTTAAAAACAAAAAAGGGAAGATTATGTTCCGTGTTACTGAAGAAAGTTTAATGGACCGTCTAAATACTATAACCCATCTTGCCTGCTTATCCATCCCTGAATATTGCAGGGTGTTGACAGTTCACGGATCCATGGATGAAACTGTACCTGCAGAAGATGCTTTAGAGTTTTCTAAGTTCATATTAAATCATGAATTGTGCATCATAGAAGGGGCTGATCATGAATACACTTGTCACCAAGATGAATTGACCAGCTTAGTTTTGGAATTTATCAAGGTTCATAATGATAAGGAAAACAATACATATAAGCAGACACGATTTGGAAGAGCAGATAAACCTATCCATTCACGATTCTAG 840 0.3857 MGDSVTQRRMSVTNYHGENLVGILHDASSTSLVIVCHGFQSSKERIPMVNLAAALEKDGISAFRFDFAGNGESEGSFQYGNYYREVEDLRAIVQHFREKKYIITTIVGHSKGGNVVLLYASKYKDIHTVVNISGRFNLARGMESRLGENFIQKIKQDGFIDVKNKKGKIMFRVTEESLMDRLNTITHLACLSIPEYCRVLTVHGSMDETVPAEDALEFSKFILNHELCIIEGADHEYTCHQDELTSLVLEFIKVHNDKENNTYKQTRFGRADKPIHSRF 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00520 279 SUPERFAMILY alpha/beta-Hydrolases 5 253 IPR029058 -
Trre1g00520 279 Gene3D alpha/beta hydrolase 2 274 IPR029058 -
Trre1g00520 279 Pfam Serine aminopeptidase, S33 30 146 IPR022742 -
Trre1g00520 279 PANTHER RE40534P-RELATED 7 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00520 Trre-Chr1 3878144 3881392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00520 31 125 Acyl Lipid Metabolism Gene Families AT2G39410 35.000 4.88e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00520 K06889 - gmx:100808881 461.84