Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00516 ATGTTGGAACAATCATTGTCATCTTCCTCACCAACATTCTGGGCTGCTCTCTACAGCTGGTTCACTCCCACCATCTTCTTCCTTCTCCTTCAACTAGTCATTGCTACCATTTACATCACTTCAACTCTTGCCAATGCCACCCACAAACATCACCAACAACAACAACAAGATCCTAACTTTTCACAAACCCATCATCATAATCATCAACACCAACTCTTTAGATCTCCTTCTGTTTTACAAAGACTCAAATCCATCAACTTTTACTCTTACCCTGCTTATAGATCCCAACATGAACAAGAACAACCTCAACAACTTCAAACCTACGAAACTGAAACACAAATCCCACAACTTGCTAGATCTCCTTCTGTTTTACAAAGACTCAAATCTATCAACCTTTATAGTTACTTTCCTTCTCAACCCTTCACTTCAAAACTCGAAAACACTAACGTTTTCACTCATGAAACCCAGCATGTGGAGGTTAGAAAAACAGAGGAAAAAACAGAGGAAGAAACAGAGGAAGATGATGTTTTGGGACATATAAGGGACAACCTAGGAGGAAACAACGAAGAAGAGGGTAATGTTTCTTTGGAAGAGGTTTTCATGAAATTGCAGGGGCAAGGAGGTAATTTTGCAAGAACACATTCGGATACTATGCCGGATTCAGGGGAGGTTCCGGTGAAGCTTTCGAGGAAGATGAAGAAATCTGCGAGCAGTAAATCGGCGTTTGGGCATTTCAAGGAAGATGACATTGTGGAGAAGCGTAGGCCGGCCACCGTGAAAGAGGCGAAGGTGGTCCCGACCGCGGTGGATGAGGATGAGTTGGTTGATTCTAAGGCTGATGATTTCATCAACAAGTTTAAGCAGCAGTTGAAGTTGCAGAGGATTGATTCAATTATGAGGTATAAGGATATGATTAACAAAGGAAGTAGCAAGTGA 936 0.4188 MLEQSLSSSSPTFWAALYSWFTPTIFFLLLQLVIATIYITSTLANATHKHHQQQQQDPNFSQTHHHNHQHQLFRSPSVLQRLKSINFYSYPAYRSQHEQEQPQQLQTYETETQIPQLARSPSVLQRLKSINLYSYFPSQPFTSKLENTNVFTHETQHVEVRKTEEKTEEETEEDDVLGHIRDNLGGNNEEEGNVSLEEVFMKLQGQGGNFARTHSDTMPDSGEVPVKLSRKMKKSASSKSAFGHFKEDDIVEKRRPATVKEAKVVPTAVDEDELVDSKADDFINKFKQQLKLQRIDSIMRYKDMINKGSSK 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00516 311 MobiDBLite consensus disorder prediction 49 68 - -
Trre1g00516 311 PANTHER COTTON FIBER (DUF761) 7 309 - -
Trre1g00516 311 Pfam Cotton fibre expressed protein 273 306 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00516 Trre-Chr1 3858932 3859867 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00516 - - psat:127097862 404.06