Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00507 ATGAGGGAAGAAAATAGTATCAACAACAACCCATCAGAAAACAAGTCCAAAGTTTCAAAATTTTCCGATCAAAATCAACCACCAAAGCTTCAAACCACAAAAGGAACCAACCCCAACAACAATCATTCAAAGCCAAGGTTATGGGGTGCACACATTGTAAAAGGGTTTTCAGCTGACAAAAAAACCAAACAACAATCAACAGTTCTTACAAAAAAACAGACAACAATAACAACAACAACAACAACCTCGGATGTTGCTAACCAGAAAAACCCTTTTGTTCCAGCTCAATCAAGAGTGAAAAGATCCTTAATTGGTGATTTGTCATGTTCTCAAGTTCATCCACATGCTTTTCCAACACATAGGAGACAATCATCAACTGATTTGTTCACTGAGTTAGATCATATGAGAAATTTGTTGCAAGAGTCTAAGGAGAGAGAGTCTAAGCTGAATGCTGAGTTGGCTGAGTGTAGGAAGAATCAGAATGAGGTTGATGAGCTTGTGAAGAAAGTTGCTTTGTTAGAAGAAGAGAAAACTAGTCTCTCTGAGCAATTGGTTGTATTGAGTAGGAGCTGTGGATTGGAGAAACAAGAAGAAGTTGTGAAAGGGGAAAACAAGGATAGTTCTATGCAGAATCTTGAGCTTGAAGTTGTTGAGTTGAGAAGGTTGAATAAGGAGTTGCATATGCAGAAGAGGAACCTTACTTGCAGGCTCTCTTCTATGGAGTCTCAATTATCTTGTTCCCCTAACTCTTCAGAGAGTGACATTGTTGCCAAATTTAAAGCCGAGGCATCATTGCTCCGGCTCACGAACGAAGACCTGAGTAAACAAGTAGAAGGCTTACAAACAAGCAGATTAAATGAAGTGGAGGAACTAGCCTACTTGAGGTGGGTGAATTCATGTTTACGAACTGAGTTGAAGAATACATGCTCAACATTGGATTCTGATAAGTCATCTAGCCCTCAATCTGTTGTGAGTAGTAGCGGAGATTCTATTAGTTCTTTCTCTGATCAAAGCGGTAGCGCAAATAGCTTCAATTTCGTTAAGAAGCCAAAAAAGTGGCCAATAACTAGTAATGATCATTTGTCACAAGTAGAGTGTACAAATAGTAGTCTCATTGAGAAAAATTGGATTGAATCAATTTCTGAGGGAAACAGAAGAAGACATTCAATTAGTGGTTCCAATAGCTCAGAGGAAGAGGTTGTTGTATTCAATAAAAGAAGACAATCTAATTGTTTTGATTCTTTTGAATGTTTAAAAGAAATGGAAAAGGAATCATTGCCAATGCCAATTCAACAATCTGTTTTGGAAAAGCGGGCGCTAAGGATTCCTAATCCTCCTCCAAGACCTTCTTCATGTTCTATTTCAAGTAAAACAAAACAAGAAAGCTCGGTTCAAGTTCAAGTTCAACCTCCTCCACCTCCGCCTCCACCACCACCTCCTATGAGTTTTGCATCGAAAAGTAATACAGCAATGGTAAAACGAGCGCCACAAGTGGTTGAATTGTACCACTCACTCATGAAGAGAGATTGTAGAAGAGATTCTTCAAGTGGAGGACTTTCTGATGCTCCTGATGTTGCAGATGTTCGTAGTAGCATGATTGGAGAAATCGAGAACCGTTCATCGCATTTACTAGCTATAAAGGCAGATATTGAAACACAAGGAGAATTTGTAAATTCATTGATTAGAGAGGTGAACAACGCAGTTTATGAGAACATAGATGACGTAGTTGCATTTGTGAAGTGGCTTGATGATGAACTTGGCTTCCTTGTCGATGAAAGAGCCGTTCTTAAACATTTTGATTGGCCGGAGAAAAAAGCCGACACATTAAGAGAAGCGTCATTTGGATATCAAGATTTGAAAAAATTGGAATCTGAAGTTTCCTCCTACAAGGACGACCCTCGGCTACCTTGTGATATTGCTCTAAAGAAAATGGTTGCATTATCAGAAAAGATGGAACGTACAGTTTATACACTTCTCCGCACGAGGGATTCACTAATGCGAAATTGCAAGGAGTTTCAAATTCCTGTAGAATGGATGCTTGATAATGGAATTATTGGCAAGATAAAACTAGGCTCAGTAAAATTGGCCAAAAAGTATATGAAAAGGGTAGCCATGGAAGTTCAAACAAAGTCAGCATTTGACAAAGATCCTGCAATGGATTACATGGTTCTCCAAGGAGTGAGATTTGCTTTCAGAATCCATCAGTTTGCAGGAGGATTTGATGCAGAAACAATGCATGCATTTGAAGAACTTCGCAATCTTGCTTCTCTACTTAACAAAACATAA 2286 0.3885 MREENSINNNPSENKSKVSKFSDQNQPPKLQTTKGTNPNNNHSKPRLWGAHIVKGFSADKKTKQQSTVLTKKQTTITTTTTTSDVANQKNPFVPAQSRVKRSLIGDLSCSQVHPHAFPTHRRQSSTDLFTELDHMRNLLQESKERESKLNAELAECRKNQNEVDELVKKVALLEEEKTSLSEQLVVLSRSCGLEKQEEVVKGENKDSSMQNLELEVVELRRLNKELHMQKRNLTCRLSSMESQLSCSPNSSESDIVAKFKAEASLLRLTNEDLSKQVEGLQTSRLNEVEELAYLRWVNSCLRTELKNTCSTLDSDKSSSPQSVVSSSGDSISSFSDQSGSANSFNFVKKPKKWPITSNDHLSQVECTNSSLIEKNWIESISEGNRRRHSISGSNSSEEEVVVFNKRRQSNCFDSFECLKEMEKESLPMPIQQSVLEKRALRIPNPPPRPSSCSISSKTKQESSVQVQVQPPPPPPPPPPPMSFASKSNTAMVKRAPQVVELYHSLMKRDCRRDSSSGGLSDAPDVADVRSSMIGEIENRSSHLLAIKADIETQGEFVNSLIREVNNAVYENIDDVVAFVKWLDDELGFLVDERAVLKHFDWPEKKADTLREASFGYQDLKKLESEVSSYKDDPRLPCDIALKKMVALSEKMERTVYTLLRTRDSLMRNCKEFQIPVEWMLDNGIIGKIKLGSVKLAKKYMKRVAMEVQTKSAFDKDPAMDYMVLQGVRFAFRIHQFAGGFDAETMHAFEELRNLASLLNKT 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00507 761 MobiDBLite consensus disorder prediction 440 485 - -
Trre1g00507 761 MobiDBLite consensus disorder prediction 467 483 - -
Trre1g00507 761 MobiDBLite consensus disorder prediction 451 466 - -
Trre1g00507 761 SUPERFAMILY Formin homology 2 domain (FH2 domain) 470 480 - -
Trre1g00507 761 Coils Coil 209 243 - -
Trre1g00507 761 MobiDBLite consensus disorder prediction 7 44 - -
Trre1g00507 761 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 88 753 IPR040265 -
Trre1g00507 761 MobiDBLite consensus disorder prediction 310 340 - -
Trre1g00507 761 MobiDBLite consensus disorder prediction 1 46 - -
Trre1g00507 761 Coils Coil 132 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00507 Trre-Chr1 3785331 3788946 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00507 - - mtr:11411533 1187.56