Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00490 ATGCTTCACAACACCACCACTTCCTTCAACAGTTCCTCAATTTCAGAACAAATGAACCAAAAATTGTCAAATCAACTTCAACCCTACCAACCAATGCTCAAAGAATCAATCAACCGTTTCTTAACTGAATACCGAAACGGAGCTACCAATTTCACCGATTTCAGCTTAATCTTTTCCCGCACGCTTCATAGTACTCCGGACCCGCCGATTCCACTTGTTTGGTTCTACTCGGCGCTTGAATTTCATACTAACAGGTTGGGAATGGAAATAGAAGGTTCTAGAACTTCAGTGATGGCGGTTAAGAGTTTGTTTCAGTTGTTGGTTTCGTGTTCTGATGGAAGTGTGTCGATGAAGAGAATCGGTGTTCTTGCGCCTTTGGTGTTTGAGATTTACCGTTTGATGGTTCATGAGAAAGAAGTGATGAAGAGTGAAATTGAGGGTTTGGTGGAAGGAGTTGTTAGTTATTGTAGTATTTTTTGTATGAAGAGTGAAGTTGAGGTTTTAGGTGGTGATGGGGTTGGGGTTTTGGAGAAGGATTTTGTCGATTTGATTCCGGTTTGGTTGGTTGGTTGTGATGATGGTGGTGGCGAGGTTGGGGTTGGTGATTGTTTGAAGGGGTTTTTCCCTTTGGTGAGTGATCAAATTCGAAAGCAAATTGAGATGGGTTGTGAGGTTGGTGTTTTGGCTGGGGTTGTTATGTTTGAAGCTCTTTTGTTGAAATTGTGTTTGATTTTTGATGCGGGGATCACACGAGGGGAGAAGGAGAAGAAGTTGCAAGCTTCCGCAGCTCAGATCATGATGGGGTTTCAGAATTTTTATTTTTTGGATACCCTTTTCAGGATGATGTTGGAGCCAGCTATGCCGGTGATCTCTTTGCTGGGTTCTGAAAACGAAGTTCTTTTAAAAGAAGTCATGTACAATTCTGTGATGATGATGGATTATTCATTCATCAATCGTCAAGCCGGAGTTTCACTGTATGCCAACAGCCTTAAAGATTTTGCTATTAATTGGTTGTTCGTTGCTGAGTTAGCTCTACAGTCTGCTAGGGAAAATGGTGATCAGGGGAAAGCTACTTCTTATGTAAATGCCTTTTGTAGGTCCTGCATTCCCATTCAGTTGATCAACTGGGTTACTAGTCAAAGTGGCATAGACAGAAAGATCGGCAGACCATATGTTTCCAGTCCCTTAGATCTTATTAAATGGCTTCTTGTTGTTGAGGAACACGGATTGGCGATATTTGGCTGTGGAATTGCCAAGCATCGTGCAAAGGCTTTCCTTTTCACTTCAAGAACAGTGTATGTTCCTCCAGTAGTCAAACATCACTTTTTAAATTCTACACATGGAGGGTCTGTGGCAGATAGAGTTCGTGGTGGTGATGTAGAGATGCATGATACTGTGGACACCAGAAGTTTGTCCGATGATGATAGAATGAACACGACCACCACTACTGATGGAACTAGAAAACGCAAAGAAGGAATTGAGGATGATACAAAAGCACAGCTCAAGTATATGAGATGCCAGTTTCACGAGAACTCAGTGAGAGAAAACTCGTTTGTATTCAGGCAACAGTGA 1572 0.4205 MLHNTTTSFNSSSISEQMNQKLSNQLQPYQPMLKESINRFLTEYRNGATNFTDFSLIFSRTLHSTPDPPIPLVWFYSALEFHTNRLGMEIEGSRTSVMAVKSLFQLLVSCSDGSVSMKRIGVLAPLVFEIYRLMVHEKEVMKSEIEGLVEGVVSYCSIFCMKSEVEVLGGDGVGVLEKDFVDLIPVWLVGCDDGGGEVGVGDCLKGFFPLVSDQIRKQIEMGCEVGVLAGVVMFEALLLKLCLIFDAGITRGEKEKKLQASAAQIMMGFQNFYFLDTLFRMMLEPAMPVISLLGSENEVLLKEVMYNSVMMMDYSFINRQAGVSLYANSLKDFAINWLFVAELALQSARENGDQGKATSYVNAFCRSCIPIQLINWVTSQSGIDRKIGRPYVSSPLDLIKWLLVVEEHGLAIFGCGIAKHRAKAFLFTSRTVYVPPVVKHHFLNSTHGGSVADRVRGGDVEMHDTVDTRSLSDDDRMNTTTTTDGTRKRKEGIEDDTKAQLKYMRCQFHENSVRENSFVFRQQ 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00490 523 PANTHER OS01G0600300 PROTEIN 16 517 - -
Trre1g00490 523 MobiDBLite consensus disorder prediction 465 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00490 Trre-Chr1 3648169 3651844 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00490 - - mtr:11412552 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00490 1 3648169 3651844 Trre1g00490 1 3648169 3651844 ECH