Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00420 ATGGATATATCTGCCTCAAAATATAGTGGTGCAACTAGTGAATCTGGTTGGACTCAATACTTGAGCCAATCCTCTATTTCTGAGAGTTATTTCCAAAGAAAAGATGGGCATGTAGGGTATGAAGAAAATGGAACAAGATTTAATGTGGAGGAAAAATTTGAAGAAGATTTATCTATGGTATCTGATGCTTCTTCTGGACCTCCACATTATGACAATGAATACTATTGCGATCTTTCTTCTACAACCAAGGAATCCATGAAGAAGAAAAATGTCAAAAAATTTGATAGAATTAGTCAACAACCTTCACCTCTTGATGACACTGCTAGCTCCCCATTTTTCATTTGTCCTAAGAAGAATCATAAGAAGCAAGACAATTTATCAGGGAATGGAGCAGTGAAAAGTGCATTGGATTTTTCCAAGTGTATATGTGCAGCAAGAAGAAAGTTACTAGCTCCCCATTGTTTTGATTTTGAATATTCGTTTGTTCTATTTTGTTTTCCATAA 504 0.3512 MDISASKYSGATSESGWTQYLSQSSISESYFQRKDGHVGYEENGTRFNVEEKFEEDLSMVSDASSGPPHYDNEYYCDLSSTTKESMKKKNVKKFDRISQQPSPLDDTASSPFFICPKKNHKKQDNLSGNGAVKSALDFSKCICAARRKLLAPHCFDFEYSFVLFCFP 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00420 167 PANTHER OSJNBA0091C07.3 PROTEIN 11 126 IPR044670 GO:0009690|GO:0009691
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00420 Trre-Chr1 3045475 3046175 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00420 - - tpra:123917508 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00420 1 3045475 3046175 Trre1g00420 1 3045475 3046175 ECH
Trre1g00420 1 3045475 3046175 Trre5g04943 5 51100577 51101534 PCT