Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00377 ATGGCTGGTCGAGGAGATGTTTTCAAAGGAAAAAGGGACAATAATGTCCCACAACAATGCAAGCCAAGCCCATCAATTTTGAAACTAAATGCAAAACTCAAATGGGAAAAAGCCCATGAGCCTCTTCACGAAGATATTGATGTAAGAAAAACTTGTGGTGTTGGGCCTGGGCTTGCTTTTGCTAACGAAGTTGTTAAAAAGAGAGGTTGTGTTGTGGGACTTGTTCCTTGTGCTGTTGGTGGTACGAGGATTGAAGAGTGGAAAAATGGGTCATTTTTGTATAATCAATTGGTGAGAAGATCTATTGAATCGGTTAGGGATGGTAGTGGTGTAATAAGAGCAGTTTTATGGTATCAAGGTGAGAGTGATACTGTAAGAGAAGAAGATGCTGATGCATATAAGAGTAGAATGGAGAATTTTATTCAGAATATTCGGTCAGATCTTCATCTTCCAGACCTTCTTGTTATTCAGGTAGCACTTGCATCAGGGGAAGGAAAGTTTATAGAGAAGGTGAGACATGCTCAATTGGGTATCAAATTGCCTAATGTCAAGTGTGTCGATGCCAAAGGATTGCGTCTCAAGGCAGATAAACTTCACCTTACCACAATGTCTGAGGTTCATTTGGGCATCCAGCTAGCTCATGCCTATCTCACTTCAAAAAGCCATAACTTTACTCATACACAAGTTAGCTAA 693 0.404 MAGRGDVFKGKRDNNVPQQCKPSPSILKLNAKLKWEKAHEPLHEDIDVRKTCGVGPGLAFANEVVKKRGCVVGLVPCAVGGTRIEEWKNGSFLYNQLVRRSIESVRDGSGVIRAVLWYQGESDTVREEDADAYKSRMENFIQNIRSDLHLPDLLVIQVALASGEGKFIEKVRHAQLGIKLPNVKCVDAKGLRLKADKLHLTTMSEVHLGIQLAHAYLTSKSHNFTHTQVS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00377 230 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 1 223 - -
Trre1g00377 230 SUPERFAMILY SGNH hydrolase 14 218 - -
Trre1g00377 230 MobiDBLite consensus disorder prediction 1 20 - -
Trre1g00377 230 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 1 217 IPR005181 -
Trre1g00377 230 Gene3D SGNH hydrolase 1 219 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00377 Trre-Chr1 2688816 2690787 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00377 - - gmx:100793278 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00377 1 2688816 2690787 Trre1g00377 1 2688816 2690787 ECH
Trre1g00377 1 2688816 2690787 Trre5g04867 5 50533487 50535658 PCT