Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00363 ATGTTAGTTCATGTACAATCCAATAAGAGATTCATTATACTTGTTGGAGAGGTTGAGAAGTTAGATCTTATAACTGCTGCTATGGGACATGCATTGGCTACAGAAGGAGGATTCTGCACCGGAAGTGCAAGAGTTATAGATCACCAACGATTGAGTAGTTCTGGCTACGTCTTTTTTGCTTCTTTGCCTCCATATCTTGCAAGCGCTGCGATTACAGCCATTAATGTCCTTGACGAAAATCCCAATCTGTTAACGAAGTTGAAGAATAACATTGCTGTGTTATGGAAAGGGTTATCGAATATACCAGGCTTCACAATTGCAAGTCATCCAGAGTCTCCAATTGTTTATTTGAGATTAAAGAAGTCAACCGGTTCTTTGAAAGATGACCTACATCTGCTTGAAAATATTGCCGAGCGTGTTTTGAAGGAAGATTCTGTATTTGTGGTGGCTTCCAGAAGATCATCATTGGACAAGTGTAAATTGCCTGTAGGAATTAGATTATTTATTTCTGCAGGGCATTCAGAATCTGATCTTCACAAGGCATCTGAATCATTGAAAAGGGTTGTGACATTAGTCCTCAGTGGTCATAGTTGA 594 0.3939 MLVHVQSNKRFIILVGEVEKLDLITAAMGHALATEGGFCTGSARVIDHQRLSSSGYVFFASLPPYLASAAITAINVLDENPNLLTKLKNNIAVLWKGLSNIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVFVVASRRSSLDKCKLPVGIRLFISAGHSESDLHKASESLKRVVTLVLSGHS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00363 197 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 18 188 - -
Trre1g00363 197 Gene3D Aspartate Aminotransferase, domain 1 81 183 IPR015422 GO:0003824
Trre1g00363 197 Pfam Aminotransferase class I and II 20 185 IPR004839 GO:0009058|GO:0030170
Trre1g00363 197 Gene3D - 19 80 IPR015421 GO:0003824
Trre1g00363 197 SUPERFAMILY PLP-dependent transferases 16 189 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00363 Trre-Chr1 2549965 2555739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00363 18 49 Acyl Lipid Metabolism Gene Families AT4G36480 78.125 1.45e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00363 K00654 - gmx:100785505 295.819