Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05269 ATGGGAACCAAAATTAAATATTCCATAAATCTTCTAGCAAGGAACAAGTTAGCTGTGGGTGGAGTGAATGTGTGGGAGCATTATCAGAACAAAAGGTGGCTGACCAATAAACATCACAGGTTTAGAATCAATAAATTGCAAGGTCAAATCATGGATAAGATGCTTGACAAAAATAATATAGAATCCATAAAAAAGACGATGCAGATGCATGAAGATATCTTCAAACATCAGGTAAGAGAACTACACAGAATATATAGTGTGCAAAAGATGCTGATGAATGAGCTAAGAAACAAAAATAGACAACAAAATTTTTGGAATCCAATGAATGACATAGATAAAAAAATTTCAAGAGGTTTTGATCTTGAAAAGCCTGCTATAGAAGGCACTTTTTTTGGATCATCATTTGGCATTGATGAAGGTGAGGTAGGGACTAGTTCCTACACTACTGCATTTCAGAGTTGTGAATTAAGTACTGTTGGTGATTGTTCTAATGAAGAAATGGAAGTGGATTTGACACTAAGCATAGGAGGTAGCCAGCTTAATAAGAATTCTAATATTCACAACTTTAATTAG 573 0.3421 MGTKIKYSINLLARNKLAVGGVNVWEHYQNKRWLTNKHHRFRINKLQGQIMDKMLDKNNIESIKKTMQMHEDIFKHQVRELHRIYSVQKMLMNELRNKNRQQNFWNPMNDIDKKISRGFDLEKPAIEGTFFGSSFGIDEGEVGTSSYTTAFQSCELSTVGDCSNEEMEVDLTLSIGGSQLNKNSNIHNFN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05269 190 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 42 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05269 Trre-Chr15 62025955 62026620 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05269 - - tpra:123908832 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g05269 15 62025955 62026620 Trre15g05269 15 62025955 62026620 ECH
Trre15g05269 15 62025955 62026620 Trre3g02184 3 19586192 19588128 PCT