Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05262 ATGGCTGAAGTTTACACTTTAGTTGTCAGGAAACCTTGTTTTGATCTTCCAACCGGTTGCCCACAATGTCTCTCTGCTTTTATCTATCTCAATTTCGCTAAAATTCCTTTTCAATTGAATTTTCACTTAAACGATCCACATTCTGGTAAAATTCCTTACATTGAGGTTGGTGATGATTATGTGGCATATGATAATGAGAATGGAGGGATTATTGAGTGTTTAAAGAAAGATGTTGGTGTAATTGATTTAGATAGTGAAGTTTCTTCACTTCCTGATTGGGTATCAATCAAAGCAATTCTTACAACTTGGCTTCATGATGCACTTGTTTATGAACTTTGGGTTGGATCTGAAGGTTCATCTGCTTATAGTATATATTATTCTGATCTTCCTTGGCCTATTGGGAAGGTTCTGTCTTCCAAGAAAGCTCGTTGGGTGAAATCGAAACATGGGATAACTGATGACAATGCTGTAGTCAAGCAAGAAGAGATTTATGTGAGGGCGAGCTATGCTTATGATGCTCTATCAAAATTGTTAGGTGAAAAGAACTACCTATTCAAAAACAGCCCATCAAGCTTGGATGCTATTTTTCTTGCACATGGACTTGTTGTTCTTCAAGCTTTACCGGAATCTTCAACACTGCGGATCAAATTTTCTGAACATGATAATTTAGTTAGATATGTGCAAAAATGTAAGACCGAACTTATAGAAGCTGGTCCACATTCTCATACAGATGCATCACCATCGGGCGCCAGAAGTCAATCAACTAAGAGACCAAAGCCGAAGAGCGTACCGAAAAGGGAGAAAACAGAGGTGGAGAAAACCTTTAAAAGAAGGGGAAGCTATTTCGTGGCAGCACAGTTTGTTGCAGTTGTTGTTTTTCTCACACTTATGTTGACATTTGATGGTACTGAAATGGAGGTAGAAAATGATGTTGATGGAGATCTTGATCTATAG 954 0.3816 MAEVYTLVVRKPCFDLPTGCPQCLSAFIYLNFAKIPFQLNFHLNDPHSGKIPYIEVGDDYVAYDNENGGIIECLKKDVGVIDLDSEVSSLPDWVSIKAILTTWLHDALVYELWVGSEGSSAYSIYYSDLPWPIGKVLSSKKARWVKSKHGITDDNAVVKQEEIYVRASYAYDALSKLLGEKNYLFKNSPSSLDAIFLAHGLVVLQALPESSTLRIKFSEHDNLVRYVQKCKTELIEAGPHSHTDASPSGARSQSTKRPKPKSVPKREKTEVEKTFKRRGSYFVAAQFVAVVVFLTLMLTFDGTEMEVENDVDGDLDL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05262 317 MobiDBLite consensus disorder prediction 237 271 - -
Trre15g05262 317 CDD GST_C_Metaxin 162 227 - -
Trre15g05262 317 PANTHER METAXIN RELATED 6 291 - -
Trre15g05262 317 SUPERFAMILY GST C-terminal domain-like 161 231 IPR036282 -
Trre15g05262 317 Pfam Glutathione S-transferase, C-terminal domain 169 229 IPR033468 -
Trre15g05262 317 PIRSF Metaxin 1 314 IPR017410 GO:0001401|GO:0007005
Trre15g05262 317 Pfam Glutathione S-transferase N-terminal domain 21 117 IPR012336 -
Trre15g05262 317 CDD GST_N_Metaxin 6 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05262 Trre-Chr15 61999469 62002104 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05262 K17776 - gmx:100807761 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g05262 15 61999469 62002104 Trre15g05262 15 61999469 62002104 ECH
Trre15g05262 15 61999469 62002104 Trre3g02195 3 19732503 19737972 PCT