Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05064 ATGTTTAGATTAAAGAATAGTGAAAACCTTGCACGGTTCTTGTATCAGAAAACTCTGCATAATAGTAATTCCATGGCTTATTCAATAGGCTATGTTGATCCTTGTTCCCATTTGAGCAAGGTTTATGCTAATGCTTTTGGGGTTAGTAGAAGAATTGATAATAGAAGAATTGAATTTGGTAGAAAAAGTTGTGGCTTTTATACCAGTTGTAGTAATAATAGTAAATTTTTTGTGAGGGCTAATGCAAGGCCTCGCGGCTTTGCGTCTGATTTGGAACAAGGGAATTCTGTTGGGGGTGATGCTAATCTTATTAAGGTTGATAATGGTGGAGTAAATGGAAGTCCTGCTATGCCTCGTTGTTTCCGAGATCAACGTATGTCTGAGAAACTTGTTGTTGCTGTTGATGTAGATGAGGTATTAGGAAACTTCGTATCGGCTCTCAACAAGTATATTGCAGATCAATATTCATCAAATTATTCAGTTTCTGAATATCATGTGTACGAGTTCTTTAAGATATGGAACTGTTCGCGTGACGAAGCTGATGTCCGCGTTCATGAGTTTTTTAAGACACCATATTTCAAGTCAGGGATTCACCCTCTCCCAGGTGCTCAGACGGCAATGCAAAAGTTATCAAGATTTTTTAACCTATCAGTTGTAACGTCTAGGCAGAATGTAATTAAGGATCACACAATTGAATGGATAGAGAAGCATTTCCCAGGACTGTTTCATGAGATTCACTTTGGTAACCACTTTGCACTTGATGGGAAATCAAGACCAAAATCAGAGATTTGTAGGTCTTTAAATGCCAAGGTTCTTATTGATGATAATCCGCGGTATGCGATAGAGTGTGCTGAAGTTGGAATGAAAGTTCTACTTTTTGATTATGAAGACTCATATCCTTGGTCCAAGAATGAGTTAGTTGATAAGCACCCTTCAGTGACCAAAGTTAAGAACTGGAGCAACAATTGA 969 0.3798 MFRLKNSENLARFLYQKTLHNSNSMAYSIGYVDPCSHLSKVYANAFGVSRRIDNRRIEFGRKSCGFYTSCSNNSKFFVRANARPRGFASDLEQGNSVGGDANLIKVDNGGVNGSPAMPRCFRDQRMSEKLVVAVDVDEVLGNFVSALNKYIADQYSSNYSVSEYHVYEFFKIWNCSRDEADVRVHEFFKTPYFKSGIHPLPGAQTAMQKLSRFFNLSVVTSRQNVIKDHTIEWIEKHFPGLFHEIHFGNHFALDGKSRPKSEICRSLNAKVLIDDNPRYAIECAEVGMKVLLFDYEDSYPWSKNELVDKHPSVTKVKNWSNN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05064 322 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 130 278 IPR010708 GO:0008253|GO:0009264
Trre15g05064 322 Gene3D - 164 322 IPR023214 -
Trre15g05064 322 PANTHER NUCLEOTIDASE YQFW-RELATED 52 320 - -
Trre15g05064 322 SUPERFAMILY HAD-like 131 298 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05064 Trre-Chr15 60408149 60410546 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05064 - - tpra:123907167 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g05064 15 60408149 60410546 Trre15g05064 15 60408149 60410546 ECH
Trre15g05064 15 60408149 60410546 Trre3g02759 3 29713426 29715216 PCT