Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04989 ATGGCGGAAGTTTCTCTCATCGCTCACCTTCTCAACCAAACACTCAGTCCAGACGCCACCGCCGTCCGTTCCGCCACCGATGAGCTCGATCGCCTTTCTCTCACTCCTCACTTCCCTTTCCATCTCCTCACCATTTCCACCGGAGGAGAAAATCAAGGTCAGAAAATTGCTGCTGCTACGTATTTGAAAAACCACACGCGCCGGAATGTTGATAGCAGCGGCGCCACACCTTCTAATGTGAGCAAGGAATTCAAGGATCAGCTGATGCAAGCTTTGCTTCAAGTTGAATTTCCCGTTCTCAAGATTTTAGTTGAAGTGTTCCGAATTGTTGCTGCTGCGGATTTTGTAAGAAAGAGTTTGTGGCCGGAACTTGTGCCGAATCTGCAGTCTGCTATTCAAAATAGTAATCTTATCAACAGTTCAAATTCCACATGGAATACCGTCAATGCACTTATTGTTCTTCATGCACTTCTCAGACCCTTTCAGTATTTTTTGAATCCCAAAGTTGCGAAGGAGCCAGTACCACCGCAATTGGAACTCATAGCCAAAGAAATTCTTGTGCCTTTGCTTGCTGTATTTCATCAATTTGTTGGAAAGGCCGTAGCAAACCATGGCAGTGCAGACATTGAAACTGAGAAAGCCATCCTCACTATATGCAAATGCCTACATTTTGCAGTAAAGTCCTACATGCCATCTACTCTAGCTCCTCTACTGACTTCGTTTAGTCGGGACCTAATTAGCATTTTGAGTTTTCTGAGCTTTGATTGTACAGTCACTCAAGAAGATGTATATTTGACTAGATGGAAGTCTGCAAAAAGAAGTCTGCAAATTTTCTCTTCCCTCGTTACTCGGCACAGGAAACATTCTGACAAGTTGATGCCAGATATTATAAATTGTGCTCTAAACATAGTCAAATTTAGCAAAAATACCAGCAGACTTCCTTTCCTTTTAGAGAGGATTCTCTCCCTAGGTTTTGATGTAATTTCAAATGTGCTGGAGACTGGCCCTGGATGGCGGTTAGTTTCTCCACATTTTACAACTCTATTGGAATCTGCAATCTTCCCAGCATTGGTAATGAATGAAAAGGACATGTCAGAGTGGGAAGAAGATGCTGATGAGTATATACGGAAGAATCTTCCTTCAGATATAGACGAAGTTAGTGGATGGAGGGAGGATTTATTCACTGCCAGAAAAAGTGCAGTAAACTTACTTGGTGTTATTTCAATGTCAAAGGGGCCACCAATGGAGACTTCTGTTGACAGTTTATCAGCCAAACGTAAAAAAGGTCAAAAGAACAAAAGAAGCAATCAGCGCCGTTCTATGGGGGAGTTATTGGTGCTTCCTTTTTTGTCTAAGTTTCCCATTCCTTCTGTTTCCAACGTGTCTCAAAACAAAGTCCTGAATGATTACTTTGGAGTACTGATGGCATATGGCGGTCTGCAAGATTTTTTGAGAGATCAAGAATCTGGATTTGTGACAATTCTCGTTCGTACACGGATTTTGCCACTGTATACTGTAGCTGTTTCTATACCACACCTCATTGCAAGTGCAAACTGGGTACTTGGAGAACTAGGCTCCTGTCTACCAGAGGAGATGAGTGCTGATGTATATTCTCAATTGCTTATGGCATTGGTTATGCCGGACAAGCAGGATACTTCTTGCTATCCTGTGCGGGTTTCTTCTGCTGGGGCAATAACTACACTACTTGATAATGACTATATGCCCCCTGATTTTTTACCCGTTCTCCAAGTAATAGTTAGCAACATAGGGAATGATGAGAATGATAGCTCCATCTTATTTCAGCTTCTCAGTTCTATCATGGAAACTGGAGAGGAGAAAGTTTCAGTCCACATCCCACACATCATCCCGTCTCTAGTGGGTTCTGTGTCAAAATGGTTAACTTCCAATCTGGAGCCTTGGCCTCAGGTGGTTGAGCGTGGAATTGCTGCTCTGGCAGTTATGGGTCAGACTTGGGAAGACTCTAGGCCTGAAGTATCTGATTCTGAATCAAATGATTTTCAAGAAAAATGGGCTGCAGATCAGGCAGCAATTGGCAGAGCTTTTGCTGCACTGTTGCAGCAGGTTTGGCTTACACCTTTATCCACACAGGATCAACAAGACCAGAATTTGCTGACTACATCATGCATAGAAGATTTGTCAACTTTGCTACGGTCTGTCATGTTATCTATTGATGGAAATCAATTGATTCAAGAGTTTAAAGTGACAGAGCTGCTTTCAGTTTGGGCTGAAATGATTGCAGACTGGCATGCATGGGAAGAATCAGAAGATTTGTCAATTTTCGATGTGATTAAGGAAATTGTGAATTTAGATCGTTCATACAGGTTGAAAAACTTTCTTGTAAAAGAGGTTCCACCCCCTCCAGCTCCACCTGTGCCTGAACGTTCAATTGTAGAAGGAATTGCCACTTTTGTTAGTGAGGCCATTAAGCAATATCCTTCTGCCACATATAGAGCGTGCTCTTGTGTCCATACATTACTACATTGTCCAACCTACTCAATTGAAACCGAAGGTGTGAAGCAGTCATTGGCTATTGTTTTTTGTCAAGCAGCTTTCTCTCGCTTTGTTGAAGTTCGAAGCACGCCCAATTCACTTTGGAAGCCTCTATTGCTTGCTATCTCTTCATGCTATTTGTGTTATCCTGAAATTGTAGAAGGTATTATGGAAAAAAGTGAAGAGGGAGGTGTCACAATGTGGGCATCTGCATTGTGTCATGTATCCAGTAGCTCCTTTGAGGCTGCTGGTCTGACAACAGAGTCTGAGACAAAGTTAATTGTTATGACACTGGCGCAATTGATTGAGCAACTTCTGAAACAAGGGAAGTCGTATGGTGATTCAATTCAAAACTGCTTTACTTCACTAATGGAGGTATCTGTTCAGTTGAAAGAATTACAAGATGAGAAAGGAGATGAAGAAGAAGCTGAAGAGGCAGAAGATGACGAGGATGAGGATAGTGAGGACGATGACTCCGAAGATTATGATGAGGACTCTGAGGTTGAAGAATATGAAGAAACGGAAGAAGAATTTCTCGATAGGTATGCTAAAGCTGCCGAGGCATTGGAAGATGGTTCAGCTATTATTGAAGAGGGGGATGCTGAAGATCAAGAACTGGATATGGAATTAGGTCAATTACTTGACGTTGATGAGCAAAAAGTTGTATTGTCCTTGATAGAGAAATACCATCATGTGCTTATACAAGGACAAAGTTTGCCCTCGCAGCTCATCACAGGTTTTTTGAATGCCTTCCCCGGCTGTGGTTTGTATTTCCAGCAATACTGA 3297 0.4234 MAEVSLIAHLLNQTLSPDATAVRSATDELDRLSLTPHFPFHLLTISTGGENQGQKIAAATYLKNHTRRNVDSSGATPSNVSKEFKDQLMQALLQVEFPVLKILVEVFRIVAAADFVRKSLWPELVPNLQSAIQNSNLINSSNSTWNTVNALIVLHALLRPFQYFLNPKVAKEPVPPQLELIAKEILVPLLAVFHQFVGKAVANHGSADIETEKAILTICKCLHFAVKSYMPSTLAPLLTSFSRDLISILSFLSFDCTVTQEDVYLTRWKSAKRSLQIFSSLVTRHRKHSDKLMPDIINCALNIVKFSKNTSRLPFLLERILSLGFDVISNVLETGPGWRLVSPHFTTLLESAIFPALVMNEKDMSEWEEDADEYIRKNLPSDIDEVSGWREDLFTARKSAVNLLGVISMSKGPPMETSVDSLSAKRKKGQKNKRSNQRRSMGELLVLPFLSKFPIPSVSNVSQNKVLNDYFGVLMAYGGLQDFLRDQESGFVTILVRTRILPLYTVAVSIPHLIASANWVLGELGSCLPEEMSADVYSQLLMALVMPDKQDTSCYPVRVSSAGAITTLLDNDYMPPDFLPVLQVIVSNIGNDENDSSILFQLLSSIMETGEEKVSVHIPHIIPSLVGSVSKWLTSNLEPWPQVVERGIAALAVMGQTWEDSRPEVSDSESNDFQEKWAADQAAIGRAFAALLQQVWLTPLSTQDQQDQNLLTTSCIEDLSTLLRSVMLSIDGNQLIQEFKVTELLSVWAEMIADWHAWEESEDLSIFDVIKEIVNLDRSYRLKNFLVKEVPPPPAPPVPERSIVEGIATFVSEAIKQYPSATYRACSCVHTLLHCPTYSIETEGVKQSLAIVFCQAAFSRFVEVRSTPNSLWKPLLLAISSCYLCYPEIVEGIMEKSEEGGVTMWASALCHVSSSSFEAAGLTTESETKLIVMTLAQLIEQLLKQGKSYGDSIQNCFTSLMEVSVQLKELQDEKGDEEEAEEAEDDEDEDSEDDDSEDYDEDSEVEEYEETEEEFLDRYAKAAEALEDGSAIIEEGDAEDQELDMELGQLLDVDEQKVVLSLIEKYHHVLIQGQSLPSQLITGFLNAFPGCGLYFQQY 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04989 1098 Pfam Importin-beta N-terminal domain 25 94 IPR001494 GO:0006886|GO:0031267
Trre15g04989 1098 SUPERFAMILY ARM repeat 1 1018 IPR016024 -
Trre15g04989 1098 Coils Coil 1005 1025 - -
Trre15g04989 1098 Gene3D - 1 1041 IPR011989 -
Trre15g04989 1098 Coils Coil 960 987 - -
Trre15g04989 1098 MobiDBLite consensus disorder prediction 413 437 - -
Trre15g04989 1098 MobiDBLite consensus disorder prediction 974 1012 - -
Trre15g04989 1098 PANTHER IMPORTIN-7, 8, 11 6 1076 - -
Trre15g04989 1098 MobiDBLite consensus disorder prediction 968 1012 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04989 Trre-Chr15 59857162 59865527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04989 - - aprc:113846276 1681.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04989 15 59857162 59865527 Trre15g04989 15 59857162 59865527 ECH