Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04966 ATGAATATTCTCAGTCCTGTTACTCCCGGTCAGGTCTCGTTCTTGCTCGGGATCATTCCGGTAATTATAGCATGGATATATTCCGAGATGTTGGAGTATCGGAAAAATTCTTTAATTTCCAAATCGCACTCGGACATAAACTTGGTTGAAGTGGGAAGTGGTGTTGTTATTAAAGATGAAGAGGAAGCAGTTTTATTGGAGGGAGGAGGTAAACAGCCAGCGTCCCCAACTGCAAAAACTCGAAGCTCAACTGCCTCACCATCAATTATCCGATTCCTCTTGTTGGATGAACATTTCCTTATTGAAAATCGTTTGACACTTAGAGCCATGTCTGAATTCGGTCTTCTTTTGGCTTACTACTATTTGTGCGATCGCACAGATTTCTTTGGCTCATCAAAGAAGAGTTACAATAGGGATCTGTTCATATTCCTCTATTTTCTCCTCATCATAGTTTCAGCAATAACTTCATTTACAATACATCATGACAAGTCACCATTTTCTGGGAAATCCATACTTTACTTGAATAGGCATCAGACTGAAGAATGGAAAGGCTGGATGCAGGTATTGTTTTTGATGTACCATTATTTTGCTGCATCTGAAATCTACAATGCAATCCGTTTGTTCATTGCTGCATATGTTTGGATGACTGGATTTGGAAACTTCTCATATTATTATATTCGTAAAGATTTTAGCATGGCAAGATTTGCTCAGATGATGTGGCGGCTTAATTTCTTGGTATTGTTCTGTTGTGTTGTACTTAACAACAGTTACATGTTATATTACATCTGCCCCATGCACACCCTTTTCACTCTTATGGTTTATGGGGCACTCGGTATTTTCCACAAGTACAATGAGATTGGGTCAGTCATTGCTGCAAAAATTATTGCTTGCTTCTTGATTGTTATCTTAGTATGGGAGATACCTGGAGTATTTGAATGGGTTTGGAGTCCATTTACTTTCCTGCTAGGTTATACTGATCCTGATCCATCTAAATCACATTTTACCCGCTTGCATGAGTGGAATTTTCGCTCAGGACTTGATCGCTATATATGGATAATTGGAATGATATATGCTTATTATCATCCAACTGTTGAACGATGGATGGAAAAGTTGGAGGAAACAGAAATCAAACGCAGAATATCAATCAAAGCTTCTGTTGTGCTAATATCTTCAGTGGTGGGTTATTTATGGTTTGAGCATATATACAAGCTGGACAAAGTTACTTACAACAAATACCATCCTTATACCTCGTGGATTCCCATAACGGTTTACATATGCTTGCGCAATATTACACAAAGTTTTCGTAGCTATTCGCTGACCCTTTTTGCGTGGCTTGGGAAGGTTACCCTGGAGACTTACATATCCCAGATTCATATCTGGTTAAGGTCAGGCATTCCAGATGGTCAACCCAAATTGTTGCTTTCCCTGATCCCAGACTACCCAATGTTGAACTTCATGCTTACTACTTCCATATATGTTGCAATTTCCTATAGGCTCTTTCAGCTGACCAATACACTGAAAAACGCATTTGTGCCTGGCAAAGATGACAAGCGTCTGATACACAACATAATTACCGGGACAACAATCTCAGTTATTTTATATACGCTATCCTTTGTCTTCCTTATGATACCTGAAGTCTTCGTAAGTGTTATTATATTGACTTGA 1665 0.3886 MNILSPVTPGQVSFLLGIIPVIIAWIYSEMLEYRKNSLISKSHSDINLVEVGSGVVIKDEEEAVLLEGGGKQPASPTAKTRSSTASPSIIRFLLLDEHFLIENRLTLRAMSEFGLLLAYYYLCDRTDFFGSSKKSYNRDLFIFLYFLLIIVSAITSFTIHHDKSPFSGKSILYLNRHQTEEWKGWMQVLFLMYHYFAASEIYNAIRLFIAAYVWMTGFGNFSYYYIRKDFSMARFAQMMWRLNFLVLFCCVVLNNSYMLYYICPMHTLFTLMVYGALGIFHKYNEIGSVIAAKIIACFLIVILVWEIPGVFEWVWSPFTFLLGYTDPDPSKSHFTRLHEWNFRSGLDRYIWIIGMIYAYYHPTVERWMEKLEETEIKRRISIKASVVLISSVVGYLWFEHIYKLDKVTYNKYHPYTSWIPITVYICLRNITQSFRSYSLTLFAWLGKVTLETYISQIHIWLRSGIPDGQPKLLLSLIPDYPMLNFMLTTSIYVAISYRLFQLTNTLKNAFVPGKDDKRLIHNIITGTTISVILYTLSFVFLMIPEVFVSVIILT 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04966 554 Pfam 10 TM Acyl Transferase domain found in Cas1p 106 521 IPR012419 -
Trre15g04966 554 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 12 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04966 Trre-Chr15 59620431 59626030 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04966 K03377 - gmx:100794337 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04966 15 59620431 59626030 Trre15g04966 15 59620431 59626030 ECH