Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04963 ATGACAATGTTGAAGCCATTGGCATTTCTCATTTTCATTGTATGCACAACTTTTGTTGTAACTGAGTGCAGAAATATCCAGCCAAATGATGTCAATCTGATACGACGAACATGCAGAAGGACACCAAATTATGGACTTTGCATTCATTACCTTATTTCTGACCCTAAAGCTCCTTCAGCAGATGTCACTGGTTTAGCACTAATCATGGTTAATGTAATGAAGAACAAAGCAAACATTGCTGTAAACAAAATCCATCAACTTATTGCAACTAGTCCTCCTGATCAAAAGGCTGCACTCAATTCATGTGCATCTAAATACTACAATGCTATTCTGGTTGCTGATATCCCATCAGCCATTCAAGCTTTGCAAAGAGGAAATCCAAAATTTGCAGAACAAAGTGCAAATGATGCTGCTAATGATGCCAACAGCTGTGAGAGTAGTTTCTCAGGGAAATCACCACTCACTGCTGAAAATAATGCTATGCATGAATCGTCTGTAATAACATCAGCTATTGTCAGATTATTGTTATAA 531 0.3766 MTMLKPLAFLIFIVCTTFVVTECRNIQPNDVNLIRRTCRRTPNYGLCIHYLISDPKAPSADVTGLALIMVNVMKNKANIAVNKIHQLIATSPPDQKAALNSCASKYYNAILVADIPSAIQALQRGNPKFAEQSANDAANDANSCESSFSGKSPLTAENNAMHESSVITSAIVRLLL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04963 176 MobiDBLite consensus disorder prediction 130 149 - -
Trre15g04963 176 Pfam Plant invertase/pectin methylesterase inhibitor 32 170 IPR006501 GO:0004857
Trre15g04963 176 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 175 IPR035513 -
Trre15g04963 176 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 175 - -
Trre15g04963 176 SMART PMEI_2 29 171 IPR006501 GO:0004857
Trre15g04963 176 NCBIfam pectinesterase inhibitor domain 6 175 IPR006501 GO:0004857
Trre15g04963 176 CDD CIF_like 32 175 IPR034087 GO:0004857|GO:0043086
Trre15g04963 176 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 176 IPR035513 -
Trre15g04963 176 FunFam Invertase/pectin methylesterase inhibitor family protein 29 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04963 Trre-Chr15 59612522 59613052 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04963 - - psat:127135146 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04963 15 59612522 59613052 Trre15g04963 15 59612522 59613052 ECH