Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04961 ATGACAATGTTAAAGCCATTAGCATTTCTCATTCTCATTGTATGCACAACTTTTGTTGTAACTGAATGCAGAAATATCCAACCAAATGATGCCAATCTGATACAACAAACATGCAAAAACACTCCAAAATATGCACTTTATATGCAATACCTTAATTCTGACCCTAAAGCTCCTTCAGCAGATGTAAGAGGTTTAGCACTAATCATGGTTAATGTAATGAAGAACAAAGCAAACATTGCTATAAACAAAATTCATCAACTTATTGCAAGGAGTCCTCCTGATCAAAAAGAGCCACTCGATGATTGTGCAGATTATTACAAAACAATTGTGGTAGCAGATATTGCACAAGCCACTGAAGCTTTACTTAAAGGAAACCCAAAATTTGCAGAAGATGGTGCAAATGATGCTGTTGTTGAGGCCAAAAGCTGTGAGAGTGGCTTCAAAGGGAATTCACCACTCACTACTGAAAACAATGTTATGACTGATGCATCTATCATAACAGCAGCTATTGTTAGAAATTTGTTATAG 528 0.3598 MTMLKPLAFLILIVCTTFVVTECRNIQPNDANLIQQTCKNTPKYALYMQYLNSDPKAPSADVRGLALIMVNVMKNKANIAINKIHQLIARSPPDQKEPLDDCADYYKTIVVADIAQATEALLKGNPKFAEDGANDAVVEAKSCESGFKGNSPLTTENNVMTDASIITAAIVRNLL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04961 175 Pfam Plant invertase/pectin methylesterase inhibitor 32 169 IPR006501 GO:0004857
Trre15g04961 175 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 174 IPR035513 -
Trre15g04961 175 FunFam Invertase/pectin methylesterase inhibitor family protein 29 175 - -
Trre15g04961 175 NCBIfam pectinesterase inhibitor domain 7 174 IPR006501 GO:0004857
Trre15g04961 175 SMART PMEI_2 29 170 IPR006501 GO:0004857
Trre15g04961 175 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 175 IPR035513 -
Trre15g04961 175 CDD CIF_like 31 174 IPR034087 GO:0004857|GO:0043086
Trre15g04961 175 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04961 Trre-Chr15 59602677 59603204 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04961 - - psat:127135146 191.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04961 15 59602677 59603204 Trre15g04961 15 59602677 59603204 ECH